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anamox1_curated_scaffold_306

Search features with annotation key words

Displaying items 61-90 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_306_60
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67563..68459
DNA (897bp) protein (299aa)
gluQ; glutamyl-Q tRNA(Asp) synthetase GluQ (EC:6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Glutamyl-Q tRNA(Asp) synthetase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNW5_RUBGI
anamox1_curated_scaffold_306_61
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68593..68949
DNA (357bp) protein (119aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Peptidyl-prolyl cis-trans isomerase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0I5_LEPCP
FKBP-type peptidylprolyl isomerase
anamox1_curated_scaffold_306_62
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68962..70287)
DNA (1326bp) protein (442aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.4.13)
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:BAL94700.1}; EC=3.6.4.13 {ECO:0000313|EMBL:BAL94700.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
ATP-dependent RNA helicase RhlE Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNW3_RUBGI
anamox1_curated_scaffold_306_63

Not on your lists

comp(70572..71165)
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PQQ7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97262.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bioY2; putative high-efficiency biotin transporter BioY
anamox1_curated_scaffold_306_64
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71389..72345
DNA (957bp) protein (319aa)
Biotin-(Acetyl-CoA-carboxylase) ligase BirA Tax=Rhodanobacter fulvus Jip2 RepID=I4VVR9_9GAMM
biotin--acetyl-CoA-carboxylase ligase
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin operon repressor {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
anamox1_curated_scaffold_306_65
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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72489..72947
DNA (459bp) protein (153aa)
Putative uncharacterized protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6K8_LEPCP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_306_66
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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72997..73308
DNA (312bp) protein (104aa)
sulfur oxidation protein Tax=Acidovorax sp. MR-S7 RepID=UPI000367B213
Uncharacterized protein {ECO:0000313|EMBL:GAD21451.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sulfur oxidation protein
anamox1_curated_scaffold_306_67
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(73337..74569)
DNA (1233bp) protein (411aa)
Flavocytochrome c sulphide dehydrogenase flavin-binding Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6J8_LEPCP
flavocytochrome c sulfide dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_306_68
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(74643..74978)
DNA (336bp) protein (112aa)
Putative cytochrome c Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIJ4_METPP
cytochrome c
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_306_69
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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75195..75581
DNA (387bp) protein (129aa)
Transcriptional regulator, ArsR family Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5V6_LEPCP
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_306_trna_2
unknown

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75710..75781
DNA (72bp)
transferRNA Arg
anamox1_curated_scaffold_306_70
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75744..77405)
DNA (1662bp) protein (554aa)
Putative ABC transporter permease FbpB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVR2_RUBGI
fbpB; putative ABC transporter permease FbpB
Putative ABC transporter permease FbpB {ECO:0000313|EMBL:BAL97099.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_306_71
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77486..78568
DNA (1083bp) protein (361aa)
transport system ATP-binding protein (EC:3.6.3.30)
Putative transport system ATP-binding protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTL3_9BURK
Putative transport system ATP-binding protein {ECO:0000313|EMBL:EGJ11681.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_306_72
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78724..80154
DNA (1431bp) protein (477aa)
ctpA; carboxyl-terminal processing protease CtpA (EC:3.4.21.102)
Carboxyl-terminal protease Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTL2_9BURK
Carboxyl-terminal protease {ECO:0000313|EMBL:EGJ11680.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_306_73
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80186..80974
DNA (789bp) protein (263aa)
molybdopterin biosynthesis protein (EC:2.7.7.-)
molybdopterin biosynthesis protein MoeB Tax=Caldimonas manganoxidans RepID=UPI0003681B64
Tax=GWA2_Curvibacter_64_110_curated
anamox1_curated_scaffold_306_74
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80971..81882
DNA (912bp) protein (304aa)
TIGR00730 family protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRM7_9BURK
TIGR00730 family protein {ECO:0000313|EMBL:EHR72807.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_306_75
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81899..82816
DNA (918bp) protein (306aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
arginase (EC:3.5.3.1)
Arginase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LTK9_9BURK
anamox1_curated_scaffold_306_76
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82852..83988
DNA (1137bp) protein (379aa)
Putative oxidoreductase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVS6_RUBGI
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAL97113.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_306_77
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(84007..84318)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W95_RHOFD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
anamox1_curated_scaffold_306_78
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84315..84728)
DNA (414bp) protein (138aa)
Putative transmembrane protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W94_RHOFD
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ABD69959.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
anamox1_curated_scaffold_306_79
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84744..85055)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W93_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD69960.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
anamox1_curated_scaffold_306_80
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85162..85512
DNA (351bp) protein (117aa)
Translation initiation factor SUI1 Tax=Janthinobacterium sp. HH01 RepID=L9PDC4_9BURK
Translation initiation factor SUI1 {ECO:0000313|EMBL:ELX09614.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
translation initiation factor SUI1
anamox1_curated_scaffold_306_81
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85529..86038)
DNA (510bp) protein (170aa)
hypothetical protein Tax=Thiomonas sp. FB-6 RepID=UPI0003807F57
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16316.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
transcriptional regulator, AsnC family
anamox1_curated_scaffold_306_82
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86174..89737
DNA (3564bp) protein (1188aa)
Putative indolepyruvate ferredoxin oxidoreductase, alpha/beta subunit Tax=Variovorax paradoxus B4 RepID=T1XJW5_VARPD
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16317.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
putative indolepyruvate ferredoxin oxidoreductase, alpha/beta subunit
anamox1_curated_scaffold_306_83
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89753..91159)
DNA (1407bp) protein (469aa)
Beta-lactamase domain protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5N9_LEPCP
beta-lactamase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_306_84
unknown

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comp(91284..91499)
DNA (216bp) protein (72aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00037A07BA
anamox1_curated_scaffold_306_85
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91515..91766)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Variovorax paradoxus B4 RepID=T1X8R5_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48550.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
anamox1_curated_scaffold_306_86
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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92045..93295
DNA (1251bp) protein (417aa)
Uncharacterized protein Tax=Pseudomonas stutzeri NF13 RepID=M2UN07_PSEST
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
anamox1_curated_scaffold_306_87
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93476..94045
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=S9ZGB3_9RHOO
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM22971.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
anamox1_curated_scaffold_306_88
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94042..95319
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Thauera terpenica 58Eu RepID=T0AUA6_9RHOO
TRAP-type C4-dicarboxylate transport system, large permease component
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:CDM22972.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Displaying items 61-90 of 175 in total

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