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anamox1_curated_scaffold_311

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_311_31
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28580..30598
DNA (2019bp) protein (673aa)
Carbamoyl-phosphate synthase L chain Tax=Comamonas testosteroni ATCC 11996 RepID=H1RW83_COMTE
carbamoyl-phosphate synthase ATP-binding subunit L
Carbamoyl-phosphate synthase L chain {ECO:0000313|EMBL:EHN63430.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
anamox1_curated_scaffold_311_32
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30591..31754
DNA (1164bp) protein (388aa)
AcyL-CoA dehydrogenase domain-containing protein Tax=Acidovorax sp. NO-1 RepID=H0BT30_9BURK
putative acyl-CoA dehydrogenase
Tax=GWA2_Burkholderiales_64_37_curated
anamox1_curated_scaffold_311_33
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31854..33443
DNA (1590bp) protein (530aa)
Long-chain-fatty-acid--CoA ligase Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J5J9_COMT2
long-chain-fatty-acid--CoA ligase
AMP-dependent synthetase {ECO:0000313|EMBL:KGH03295.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
anamox1_curated_scaffold_311_34
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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33451..34140
DNA (690bp) protein (230aa)
Glutathione S transferase protein Tax=Azoarcus sp. KH32C RepID=H0PZT2_9RHOO
glutathione S transferase protein
Glutathione S transferase protein {ECO:0000313|EMBL:BAL25570.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
anamox1_curated_scaffold_311_35
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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34164..34946
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase Tax=Variovorax paradoxus (strain EPS) RepID=E6UXS5_VARPE
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28407.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
enoyL-CoA hydratase/isomerase
anamox1_curated_scaffold_311_36
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34943..36775
DNA (1833bp) protein (611aa)
terpene utilization protein AtuA Tax=Variovorax paradoxus RepID=UPI0003634799
Variovorax paradoxus strain MEDvA23 contig_48, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28505.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
anamox1_curated_scaffold_311_37
unknown

Not on your lists

comp(36836..37006)
DNA (171bp) protein (57aa)

This feature has no annotations

anamox1_curated_scaffold_311_38
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37128..41132)
DNA (4005bp) protein (1335aa)
purL; phosphoribosylformylglycinamidine synthase PurL (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphoribosylformylglycinamidine synthase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT8_RUBGI
anamox1_curated_scaffold_311_39
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41203..42072
DNA (870bp) protein (290aa)
map; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Methionine aminopeptidase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT7_RUBGI
anamox1_curated_scaffold_311_40
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42087..44819
DNA (2733bp) protein (911aa)
glnD; UTP-GlnB uridylyltransferase, GlnD (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT6_RUBGI
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_311_41
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44849..45925
DNA (1077bp) protein (359aa)
selU; tRNA 2-selenouridine synthase (EC:2.9.1.-)
tRNA 2-selenouridine synthase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN53_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_311_42
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45980..46198
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT3_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95720.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_311_43
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46195..46803
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRT2_RUBGI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_311_44
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47076..47792
DNA (717bp) protein (239aa)
rluF; ribosomal large subunit pseudouridine synthase F RluF (EC:4.2.1.70 5.4.99.-)
Ribosomal large subunit pseudouridine synthase F RluF {ECO:0000313|EMBL:BAL94800.1}; EC=4.2.1.70 {ECO:0000313|EMBL:BAL94800.1};; EC=5.4.99.- {ECO:0000313|EMBL:BAL94800.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ribosomal large subunit pseudouridine synthase F RluF Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP63_RUBGI
anamox1_curated_scaffold_311_45
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47770..48993
DNA (1224bp) protein (408aa)
Bcr/CflA subfamily drug resistance transporter Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT19_9BURK
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:EGJ11487.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Bcr/CflA family multidrug resistance transporter
anamox1_curated_scaffold_311_46

Not on your lists

49212..49475
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CXN6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97755.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transcriptional regulator/antitoxin, MazE
anamox1_curated_scaffold_311_47

Not on your lists

49475..49837
DNA (363bp) protein (121aa)
Transcriptional modulator of MazE/toxin, MazF Tax=uncultured bacterium RepID=K2EH18_9BACT
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:EKD97754.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
chpAK; toxin of a toxin-antitoxin system, endoribonuclease; pemk-like protein
anamox1_curated_scaffold_311_48
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49891..50829
DNA (939bp) protein (313aa)
miaA; tRNA dimethylallyltransferase MiaA (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
tRNA dimethylallyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP61_RUBGI
anamox1_curated_scaffold_311_49
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50848..51504
DNA (657bp) protein (219aa)
ABC transporter-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT21_9BURK
ABC transporter-like protein {ECO:0000313|EMBL:EGJ11489.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ABC transporter ATP-binding protein
anamox1_curated_scaffold_311_50
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51501..54119
DNA (2619bp) protein (873aa)
Putative ABC transporter permease Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP59_RUBGI
putative ABC transporter permease
Putative ABC transporter permease {ECO:0000313|EMBL:BAL94796.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_311_51
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54116..55279
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT23_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11491.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_311_52
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55298..56158)
DNA (861bp) protein (287aa)
Diguanylate cyclase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP57_RUBGI
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:BAL94794.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_311_53
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56291..58183
DNA (1893bp) protein (631aa)
Putative ABC transporter permease/ATP-binding protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP55_RUBGI
putative ABC transporter permease/ATP-binding protein
Putative ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAL94792.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_311_54
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58352..59125
DNA (774bp) protein (258aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
thymidylate synthase (EC:2.1.1.45)
thymidylate synthase Tax=Caldimonas manganoxidans RepID=UPI000366C12C
anamox1_curated_scaffold_311_55
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59136..59645
DNA (510bp) protein (170aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
dihydrofolate reductase Tax=Ideonella sp. B508-1 RepID=UPI00034A1418
anamox1_curated_scaffold_311_56
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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59655..60437
DNA (783bp) protein (261aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CDW95683.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CDW95683.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative exodeoxyribonuclease III (EC:3.1.11.2)
exodeoxyribonuclease III Tax=Caldimonas manganoxidans RepID=UPI00036A7045
anamox1_curated_scaffold_311_57
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60457..60987)
DNA (531bp) protein (177aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHP8_9BURK
signal peptide protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying items 31-57 of 57 in total

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