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anamox1_curated_scaffold_369

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Displaying items 61-90 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_369_61
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77620..78927)
DNA (1308bp) protein (436aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HQG8_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95255.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_369_62
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79114..79800)
DNA (687bp) protein (229aa)
Uncharacterized protein Tax=Hydrogenophaga sp. PBC RepID=I4MJ02_9BURK
FtsH-interacting integral membrane protein {ECO:0000313|EMBL:KDB51197.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein
anamox1_curated_scaffold_369_63
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80041..80439
DNA (399bp) protein (133aa)
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WI69_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EWS56476.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
conserved hypothetical protein
anamox1_curated_scaffold_369_64
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80568..81731
DNA (1164bp) protein (388aa)
carA; carbamoyl-phosphate synthetase subunit A CarA (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000255|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000255|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000255|HAMAP-Rule:MF_01209}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Carbamoyl-phosphate synthase small chain Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=CARA_RUBGI
anamox1_curated_scaffold_369_65
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81812..85084
DNA (3273bp) protein (1091aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Carbamoyl-phosphate synthase large chain Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SF85_METPP
anamox1_curated_scaffold_369_66
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85178..86044
DNA (867bp) protein (289aa)
transcription elongation factor GreA Tax=Ideonella sp. B508-1 RepID=UPI0003461586
transcription elongation factor GreA
Tax=GWA2_Curvibacter_64_110_curated
anamox1_curated_scaffold_369_67
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86158..86628)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans RepID=E8TQZ8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00234.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
anamox1_curated_scaffold_369_68
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86649..87398
DNA (750bp) protein (250aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
ribosomal RNA large subunit methyltransferase J (EC:2.1.1.-)
23S rRNA methyltransferase Tax=Ideonella sp. B508-1 RepID=UPI000348EAF7
anamox1_curated_scaffold_369_69
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87658..89562
DNA (1905bp) protein (635aa)
ftsH; ATP-dependent zinc metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
ATP-dependent zinc metalloprotease FtsH Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUH5_RUBGI
anamox1_curated_scaffold_369_70
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89768..91099
DNA (1332bp) protein (444aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQH2_9BURK
anamox1_curated_scaffold_369_71
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91155..92804)
DNA (1650bp) protein (550aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQI3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10601.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_369_72
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92896..93843
DNA (948bp) protein (316aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hemC; porphobilinogen deaminase HemC (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL54_9BURK
anamox1_curated_scaffold_369_73
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93858..94640
DNA (783bp) protein (261aa)
hemD; uroporphyrinogen-III synthase HemD (EC:4.2.1.75)
Uroporphyrinogen III synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUY5_9BURK
Uroporphyrinogen III synthase {ECO:0000313|EMBL:EGJ12153.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_369_74
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94654..95838
DNA (1185bp) protein (395aa)
hemX; putative uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUY6_9BURK
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EGJ12154.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_369_75
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95869..97116
DNA (1248bp) protein (416aa)
Putative porphyrin biosynthesis-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUY7_9BURK
Putative porphyrin biosynthesis-like protein {ECO:0000313|EMBL:EGJ12155.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hemY; putative protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
anamox1_curated_scaffold_369_trna_1
unknown

Not on your lists

97224..97297
DNA (74bp)
transferRNA Arg
anamox1_curated_scaffold_369_76
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97399..97956
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVK0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12368.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_369_77
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97994..98575
DNA (582bp) protein (194aa)
Transcription elongation factor GreB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV73_RUBGI
greB; transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_369_78
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98565..100871)
DNA (2307bp) protein (769aa)
spoT; GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate) 3'-pyrophosphohydrolase SpoT (EC:2.7.6.5 3.1.7.2)
GTP pyrophosphokinase/guanosine-3',5'-bis (Diphosphate) 3'-pyrophosphohydrolase SpoT {ECO:0000313|EMBL:BAL96909.1}; EC=2.7.6.5 {ECO:0000313|EMBL:BAL96909.1};; EC=3.1.7.2 {ECO:0000313|EMBL:BAL96909.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
GTP pyrophosphokinase/guanosine-3',5'-bis (Diphosphate) 3'-pyrophosphohydrolase SpoT Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV72_RUBGI
anamox1_curated_scaffold_369_79
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101029..101232)
DNA (204bp) protein (68aa)
rpoZ; DNA-directed RNA polymerase subunit omega RpoZ (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA-directed RNA polymerase subunit omega Tax=Rubrivivax RepID=I0HV69_RUBGI
anamox1_curated_scaffold_369_80
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101264..101884)
DNA (621bp) protein (207aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
gmk; guanylate kinase Gmk (EC:2.7.4.8)
Guanylate kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVJ6_9BURK
anamox1_curated_scaffold_369_81
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102017..102790
DNA (774bp) protein (258aa)
Sec-c motif domain protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVD4_9BURK
Sec-c motif domain protein {ECO:0000313|EMBL:EGJ12302.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_369_82
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102828..104054
DNA (1227bp) protein (409aa)
coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase CoaB/CoaC (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase CoaB/CoaC {ECO:0000313|EMBL:BAL96827.1}; EC=4.1.1.36 {ECO:0000313|EMBL:BAL96827.1};; EC=6.3.2.5 {ECO:0000313|EMBL:BAL96827.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase CoaB/CoaC Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUZ0_RUBGI
anamox1_curated_scaffold_369_83
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104051..104500
DNA (450bp) protein (150aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase Tax=Ideonella sp. B508-1 RepID=UPI0003485E09
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_369_84
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104533..105066)
DNA (534bp) protein (178aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVD1_9BURK
anamox1_curated_scaffold_369_85
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105108..106256
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUY7_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL96824.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_369_86
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106253..106759
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVC9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12297.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_369_87
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107384..108154)
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R7K3_CUPTR
Acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase {ECO:0000313|EMBL:EXI85424.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
anamox1_curated_scaffold_369_trna_2
unknown

Not on your lists

comp(108931..109018)
DNA (88bp)
transferRNA Ser
anamox1_curated_scaffold_369_88
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109086..110018)
DNA (933bp) protein (311aa)
stomatin 2 Tax=Ideonella sp. B508-1 RepID=UPI00034BF90D
SPFH domain-containing protein/band 7 family protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
Displaying items 61-90 of 138 in total

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