ggKbase home page

anamox1_curated_scaffold_356

Search features with annotation key words

Displaying items 91-120 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_356_91
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111968..112636)
DNA (669bp) protein (223aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase Tax=Caldimonas manganoxidans RepID=UPI00036B9A04
anamox1_curated_scaffold_356_92
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112652..113446
DNA (795bp) protein (265aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:3.1.11.2)
Exodeoxyribonuclease III Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL08_9BURK
Exodeoxyribonuclease III {ECO:0000313|EMBL:EHR73751.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_356_93
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113648..114040
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7UY77_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR37273.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
anamox1_curated_scaffold_356_94
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114056..114202
DNA (147bp) protein (49aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS30452.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
hypothetical protein
anamox1_curated_scaffold_356_95
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114219..114932
DNA (714bp) protein (238aa)
Putative cytochrome c Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SDS7_METPP
cytochrome c
Tax=GWA2_Curvibacter_64_110_curated
anamox1_curated_scaffold_356_96
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114964..116271
DNA (1308bp) protein (436aa)
Alcohol dehydrogenase cytochrome c subunit-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y534_RAMTT
alcohol dehydrogenase
Alcohol dehydrogenase cytochrome c subunit-like protein {ECO:0000313|EMBL:AEG93874.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_356_97
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116415..117500
DNA (1086bp) protein (362aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037F5FFF
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:AEB56671.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina (strain NK-01).;"
anamox1_curated_scaffold_356_98
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117497..118129
DNA (633bp) protein (211aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Uracil phosphoribosyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHX3_9BURK
uracil phosphoribosyltransferase
anamox1_curated_scaffold_356_99
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118173..118598)
DNA (426bp) protein (142aa)
BLUF domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXR5_RUBGI
BLUF domain-containing protein
BLUF domain protein {ECO:0000313|EMBL:BAL97802.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_100
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118611..119360)
DNA (750bp) protein (250aa)
folE; GTP cyclohydrolase I FolE (EC:3.5.4.16)
GTP cyclohydrolase I Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLG5_9BURK
GTP cyclohydrolase I {ECO:0000313|EMBL:EGJ09183.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_356_101
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119464..120807
DNA (1344bp) protein (448aa)
sun; Sun domain protein (EC:2.1.1.176)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Sun domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXR3_RUBGI
anamox1_curated_scaffold_356_102
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120838..121455
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLG3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09181.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_356_103
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121466..123778
DNA (2313bp) protein (771aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ntrY; nitrogen regulation protein NtrY (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLG2_9BURK
anamox1_curated_scaffold_356_104
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123786..124493
DNA (708bp) protein (236aa)
Two component transcriptional regulator, Fis family Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXR0_RUBGI
Fis family two component transcriptional regulator
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:BAL97797.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_trna_1
unknown

Not on your lists

124575..124647
DNA (73bp)
transferRNA Phe
anamox1_curated_scaffold_356_105
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124896..125903
DNA (1008bp) protein (336aa)
NAD-dependent epimerase/dehydratase family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL55_RUBGI
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAL93742.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_106
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125952..126725)
DNA (774bp) protein (258aa)
peptidase S1B family protein (EC:3.4.21.-)
Peptidase S1B family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL56_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_356_107
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127202..128587
DNA (1386bp) protein (462aa)
Sugar transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR17_9BURK
Sugar transferase {ECO:0000313|EMBL:EGJ10785.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
sugar transferase
anamox1_curated_scaffold_356_108
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128698..130878
DNA (2181bp) protein (727aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
Periplasmic sensor signal transduction histidine kinase Tax=Rubrivivax gelatinosus S1 RepID=L8B9Y5_RUBGE
multi-sensor signal transduction histidine kinase
anamox1_curated_scaffold_356_109
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130875..132272
DNA (1398bp) protein (466aa)
Fis family two component sigma-54 specific transcriptional regulator Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR15_9BURK
two component Fis family sigma54-specific transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_356_110
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132280..132936)
DNA (657bp) protein (219aa)
Long-chain N-acyl amino acid synthase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LPB4_9BURK
Long-chain N-acyl amino acid synthase {ECO:0000313|EMBL:EGJ10182.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_356_111
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133794..134639
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus S1 RepID=L8BAG3_RUBGE
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_356_112
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134664..137423)
DNA (2760bp) protein (920aa)
TPR repeat protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL26_RUBGI
TPR repeat protein
TPR repeat protein {ECO:0000313|EMBL:BAL93713.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_113
unknown

Not on your lists

comp(137613..138527)
DNA (915bp) protein (305aa)

This feature has no annotations

anamox1_curated_scaffold_356_114
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138887..140008
DNA (1122bp) protein (374aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL16_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL93703.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_115
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140005..141669
DNA (1665bp) protein (555aa)
FAD linked oxidase domain-containing protein (EC:1.1.3.15)
FAD linked oxidase, N-terminal {ECO:0000313|EMBL:CAD86149.1}; EC=1.1.3.15 {ECO:0000313|EMBL:CAD86149.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
FAD linked oxidase, N-terminal Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82SS0_NITEU
anamox1_curated_scaffold_356_116
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141666..142793
DNA (1128bp) protein (376aa)
Male sterility C-terminal domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL17_RUBGI
male sterility C-terminal domain protein
Male sterility C-terminal domain protein {ECO:0000313|EMBL:BAL93704.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_117
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143005..144621
DNA (1617bp) protein (539aa)
AMP-dependent synthetase and ligase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HL18_RUBGI
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:BAL93705.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_356_118
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144638..146032
DNA (1395bp) protein (465aa)
Efflux ABC transporter permease Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN21_9BURK
Efflux ABC transporter permease {ECO:0000313|EMBL:EGJ09739.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
efflux ABC transporter permease
anamox1_curated_scaffold_356_119
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146025..146828
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus S1 RepID=L8BA60_RUBGE
Uncharacterized protein {ECO:0000313|EMBL:CCF78683.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
hypothetical protein
Displaying items 91-120 of 133 in total

View Taxonomy