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anamox1_curated_scaffold_749

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_749_31
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24998..25288)
DNA (291bp) protein (97aa)
DNA polymerase beta domain protein region Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DE83_9GAMM
DNA polymerase III subunit beta
DNA polymerase III subunit beta {ECO:0000313|EMBL:AHE97467.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
anamox1_curated_scaffold_749_32
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25383..25931
DNA (549bp) protein (183aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNV2_9BURK
anamox1_curated_scaffold_749_33
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25955..26653
DNA (699bp) protein (233aa)
putative dienelactone hydrolase (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJB3_9BURK
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EHR70068.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_749_34
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26660..27853)
DNA (1194bp) protein (398aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL37330.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
anamox1_curated_scaffold_749_35
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28041..28226)
DNA (186bp) protein (62aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMW5_RUBGI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_749_36
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28260..29117)
DNA (858bp) protein (286aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM10_9BURK
anamox1_curated_scaffold_749_37
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29257..29967
DNA (711bp) protein (237aa)
nucleoside-diphosphate sugar epimerase Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F4FFBE
semialdehyde dehydrogenase NAD - binding protein
Semialdehyde dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADV28573.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
anamox1_curated_scaffold_749_38
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30004..30687)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI0003461A8E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_749_39
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30684..31694)
DNA (1011bp) protein (337aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUM7_9BURK
mammalian cell entry related domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_749_40
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31699..32547)
DNA (849bp) protein (283aa)
ABC-type transport system involved in resistance to organic solvents, permease component Tax=Polaromonas sp. CF318 RepID=J2U353_9BURK
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_749_41
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32565..35231
DNA (2667bp) protein (889aa)
Adenylate/guanylate cyclase Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT
Predicted ATPase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
anamox1_curated_scaffold_749_42
unknown

Not on your lists

comp(35244..35684)
DNA (441bp) protein (147aa)

This feature has no annotations

anamox1_curated_scaffold_749_43
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35795..36937)
DNA (1143bp) protein (381aa)
Putative uncharacterized protein Tax=uncultured organism RepID=G3CRF2_9ZZZZ
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_749_44
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37059..37691
DNA (633bp) protein (211aa)
glutathione S-transferase Tax=Acidovorax radicis RepID=UPI0002375F94
Glutathione S-transferase {ECO:0000313|EMBL:KGM39401.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
glutathione S-transferase domain-containing protein
anamox1_curated_scaffold_749_45
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37878..38453
DNA (576bp) protein (192aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVX5_HALNC
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
anamox1_curated_scaffold_749_46
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38535..39749)
DNA (1215bp) protein (405aa)
Cell division protein FtsZ Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT27_9BURK
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ftsZ; cell division protein FtsZ
anamox1_curated_scaffold_749_47
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39835..41067)
DNA (1233bp) protein (411aa)
Cell division protein ftsA Tax=Rubrivivax RepID=I0HMR2_RUBGI
ftsA; cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_749_48
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41080..41904)
DNA (825bp) protein (275aa)
Cell division protein FtsQ Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT29_9BURK
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cell division protein FtsQ
anamox1_curated_scaffold_749_49
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41904..42887)
DNA (984bp) protein (328aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase Tax=Acidovorax radicis RepID=UPI0002375515
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
anamox1_curated_scaffold_749_50
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42884..44281)
DNA (1398bp) protein (466aa)
murC; UDP-N-acetylmuramate--L-alanine ligase MurC (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
UDP-N-acetylmuramate--L-alanine ligase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMQ9_RUBGI
anamox1_curated_scaffold_749_51
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44278..45372)
DNA (1095bp) protein (365aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT32_9BURK
anamox1_curated_scaffold_749_52
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45431..46720)
DNA (1290bp) protein (430aa)
Lipid II flippase FtsW Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT33_9BURK
Putative lipid II flippase FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; Cell division protein FtsW {ECO:0000256|HAMAP-Rule:MF_00913}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ftsW; cell division protein FtsW
anamox1_curated_scaffold_749_53
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46717..48345)
DNA (1629bp) protein (543aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT34_9BURK
anamox1_curated_scaffold_749_54
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48353..49534)
DNA (1182bp) protein (394aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT35_9BURK
anamox1_curated_scaffold_749_55
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49524..51014)
DNA (1491bp) protein (497aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP10_9BURK
anamox1_curated_scaffold_749_56
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51011..52600)
DNA (1590bp) protein (530aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCY0_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_749_57
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52600..54372)
DNA (1773bp) protein (591aa)
ftsI; peptidoglycan synthetase FtsI (EC:2.4.1.129)
Peptidoglycan glycosyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT38_9BURK
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EGJ11506.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_749_58
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54369..54680)
DNA (312bp) protein (104aa)
Cell division protein FtsL Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT39_9BURK
Cell division protein FtsL {ECO:0000256|HAMAP-Rule:MF_00910}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
ftsL; putative cell division protein FtsL
anamox1_curated_scaffold_749_59
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54680..55603)
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LT40_9BURK
anamox1_curated_scaffold_749_60
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55612..56049)
DNA (438bp) protein (146aa)
Protein MraZ Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HMP9_RUBGI
mraZ; protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying items 31-60 of 69 in total

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