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anamox1_curated_scaffold_685

Search features with annotation key words

Displaying items 31-60 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_685_31
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30948..31550)
DNA (603bp) protein (201aa)
rmlC; dTDP-4-keto-6-deoxyglucose-3,5-epimerase RmlC (EC:5.1.3.13)
dTDP-4,deoxyrhamnose 3,5 epimerase Tax=Rubrivivax gelatinosus S1 RepID=L8BA46_RUBGE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_685_32
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31547..32431)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
rmlA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase Tax=Rubrivivax gelatinosus S1 RepID=L8BAG0_RUBGE
anamox1_curated_scaffold_685_33
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32451..32846)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00035FFEF2
pilus retraction motor protein
Pilus retraction motor protein {ECO:0000313|EMBL:AJD47191.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
anamox1_curated_scaffold_685_34
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32843..33082)
DNA (240bp) protein (80aa)
Antitoxin of toxin-antitoxin system, phd type Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GWM9_CUPNN
antitoxin of toxin-antitoxin system, phd type
Tax=RBG_16_Anaeromyxobacter_69_14_curated
anamox1_curated_scaffold_685_35
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33115..34014)
DNA (900bp) protein (300aa)
rmlD; dTDP-4-dehydrorhamnose reductase RmlD (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase RmlD {ECO:0000313|EMBL:BAL97479.1}; EC=1.1.1.133 {ECO:0000313|EMBL:BAL97479.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
dTDP-4-dehydrorhamnose reductase RmlD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWU2_RUBGI
anamox1_curated_scaffold_685_36
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34019..35086)
DNA (1068bp) protein (356aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dTDP-glucose 4,6-dehydratase Tax=Ideonella sp. B508-1 RepID=UPI000345EB06
rmlB; dTDP-D-glucose 4,6-dehydratase
anamox1_curated_scaffold_685_37
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35094..35759)
DNA (666bp) protein (222aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAL94427.1}; EC=2.7.7.22 {ECO:0000313|EMBL:BAL94427.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Mannose-1-phosphate guanylyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN40_RUBGI
anamox1_curated_scaffold_685_38
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35759..36538)
DNA (780bp) protein (260aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAL97481.1}; EC=2.7.7.22 {ECO:0000313|EMBL:BAL97481.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Mannose-1-phosphate guanylyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN40_RUBGI
anamox1_curated_scaffold_685_39
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36615..37631)
DNA (1017bp) protein (339aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP03_9BURK
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGJ10071.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_685_40
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37640..38929)
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN42_RUBGI
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_685_41
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38929..40323)
DNA (1395bp) protein (465aa)
Glycosyltransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN43_RUBGI
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAL94430.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_685_42
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40585..41118
DNA (534bp) protein (178aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP04_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ10072.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_685_43
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41118..42596
DNA (1479bp) protein (493aa)
ubiB; 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB (EC:1.14.13.-)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway UbiB Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN45_RUBGI
anamox1_curated_scaffold_685_44
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42728..43063
DNA (336bp) protein (112aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HN46_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94433.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_685_45
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43131..43562
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJF5_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR70176.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_685_46
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43508..43684
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Achromobacter piechaudii HLE RepID=J4PHB9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJO33207.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
hypothetical protein
anamox1_curated_scaffold_685_47
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43681..45468
DNA (1788bp) protein (596aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EGJ10076.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EGJ10076.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
aspS; aspartyl-tRNA synthetase AspS (EC:6.1.1.12)
Aspartate--tRNA ligase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP08_9BURK
anamox1_curated_scaffold_685_48
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45613..45903
DNA (291bp) protein (97aa)
Prevent-host-death family protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKZ9_9BURK
Prevent-host-death family protein {ECO:0000313|EMBL:EGJ09017.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_685_49
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45909..46226
DNA (318bp) protein (106aa)
Cytotoxic protein ccdB (LetB protein)-like protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWT0_RAMTT
cytotoxic protein ccdB
Cytotoxic protein ccdB (LetB protein)-like protein {ECO:0000313|EMBL:AEG94224.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_685_50
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46257..47282
DNA (1026bp) protein (342aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Variovorax paradoxus RepID=UPI00036DA0EF
anamox1_curated_scaffold_685_51
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47309..47761
DNA (453bp) protein (151aa)
NUDIX hydrolase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWS0_LEPCP
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACB36269.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
anamox1_curated_scaffold_685_52
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47758..48570
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP11_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10079.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
endonuclease/exonuclease/phosphatase family protein
anamox1_curated_scaffold_685_53
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48575..49894
DNA (1320bp) protein (440aa)
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Phospholipase D/transphosphatidylase protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LP12_9BURK
cls; putative cardiolipin synthetase
anamox1_curated_scaffold_685_54
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49940..51160)
DNA (1221bp) protein (407aa)
Protein containing von Willebrand factor type A (VWA) domain Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJ47_9BURK
vWA domain containing CoxE-like family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_685_55
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51177..52082)
DNA (906bp) protein (302aa)
MoxR-like ATPase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJ48_9BURK
MoxR-like ATPase {ECO:0000313|EMBL:EHR73692.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
coxD; carbon monoxide dehydrogenase, CoxD accessory protein
anamox1_curated_scaffold_685_56
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52159..52941)
DNA (783bp) protein (261aa)
coxM; carbon monoxide dehydrogenase, medium subunit CoxM (EC:1.2.99.2)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJ49_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_685_57
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52958..54580)
DNA (1623bp) protein (541aa)
Carbon monoxide dehydrogenase large chain {ECO:0000313|EMBL:EWS54180.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EWS54180.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
coxL; carbon monoxide dehydrogenase large chain CoxL (EC:1.2.99.2)
Carbon monoxide dehydrogenase large chain CoxL Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW74_RUBGI
anamox1_curated_scaffold_685_58
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55225..55692)
DNA (468bp) protein (156aa)
coxS; carbon monoxide dehydrogenase, small subunit CoxS (EC:1.2.99.2)
Carbon monoxide dehydrogenase, small subunit CoxS {ECO:0000313|EMBL:BAL97260.1}; EC=1.2.99.2 {ECO:0000313|EMBL:BAL97260.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Carbon monoxide dehydrogenase, small subunit CoxS Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HW73_RUBGI
anamox1_curated_scaffold_685_59
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55973..56983
DNA (1011bp) protein (337aa)
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJ50_9BURK
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family {ECO:0000313|EMBL:EHR73694.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
XdhC/CoxI family protein
anamox1_curated_scaffold_685_60
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56955..58379)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Proline sensor PrlS Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNA3_9BURK
Displaying items 31-60 of 81 in total

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