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anamox1_curated_scaffold_198_42

Organism: anamox1_Burkholderiales_70_40_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: 42343..45855

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 1166.0
  • Bit_score: 1876
  • Evalue 0.0
Transcription-repair-coupling factor Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLW7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 1166.0
  • Bit_score: 1876
  • Evalue 0.0
mfd; transcription-repair-coupling factor similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 1166.0
  • Bit_score: 1864
  • Evalue 0.0

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3513
ATGCAACTCCCTTCGATCGCGCCCGGCAAGCGCTACACCCGTCCCCTGCCGCCGGGCTCGGCCGACGCCCTGCTCCTGGCCCGCCAAGCCGCCGCCGCGAAGGCAGCCGGACGGATGCTCGCGGTGATCACCGCCGATGCCGCCGACGCCGCGCGGCTCGTCGACGAGATCGTCTTCTTCGACCCGGCGCTGCGCACCGCGCTCTTCCCGGACTGGGAGACCCTGCCCTACGACAGCTTCAGCCCGCACCAGGATCTGGTGAGCGAACGGCTGGCCACGCTCTGGCGTGTGGGCCATGCCGAGGTCGACGTGCTGCTGCTGCCGGCGAGCACGGCGCTCACGCGCCTGGCGCCGCCCTCGTTCTTGGCGGCGACCACCTTCATGTTCCGGCAGAAGGCGCGCCTGGACGAGGCCGCGTTGAAGGCGCAGCTGACGCTGGCGGGTTACCAGCACGTGAGCCAGGTGGTCTCACCCGGCGAATACGCGGTGCGGGGCGGCCTGATCGACCTCTTCCCGATGGGCAGCCCGGTGCCCTACCGCCTGGACCTCTTCGACGACGAGATCGACTCGATCCGCAGCTTCGACCCGGACACGCAGCGCAGTCTCTATCCGGTGCCCGAAGTGCGCCTGCTGCCCGGGCGCGAATTCCCGATGGACGAGGCCGCGCGCACCGCCTTCAGGGCGCGCTGGCGCGAGCAGCTGGAAGGTGACCCCACGCGCAGCCGCATCTACAAGGACATCCAGCAGGGCGTGGCCAGCGGCGGCATCGAGTACTACCTGCCGCTGTTCTTCGACGAGACCGCGACGATCTTCGAGCACCTGCCCGCAGGCGCGAACCTGACGCTGCACGGCGAGGTCGACGGCGCGCTGCAGCGCTTCTGGAGCGACACCCGCGAGCGGCATCGCTTCCTGCAGCACGACCCGGAGCGGCCGATTCTGCCGCCCGAGGCGATCTTCCTGCGGCCCGAGGAGTTCTTCGCGCGCACGCAGCCGCTGGCCACACTCGTGCTGCGCCCAACCGCGCCAGCGGCGGATGCGACGGATACGACAGAAGCCGATCCGGCCAGCGCCTGGACCCGGCCGCTGCCGCCGCTGGCAATCGACCGCGGCGCGACCGAACCGCTCGCGGCACTGGCGCGACACCTGGAGACGACGACGCACCGCGTGCTGCTCGTTGCCGAGAGCGAGGGGCGGCGCGAGAGCGTGCTCGAGCTGCTGCGCGAGCACCGCATCCAGCTCCCGAGCGTGGCCACGCTCGCGGACTTCCTCGCCGGCAACGAGAAGGTCGCGATCGTCGCCGCGCCGCTGGCCGCCGGCTTTCACTGGATCGAGACGCAGGGGCCGCAGGCCGGCGTCTCGGTGCAGTTCGTCACCGAGACCGAGCTCTTCGCGGCGACGCCGCAGGCGCGCCGCCGCCGCCGGCAGGAGCAGGTCAGCGACCTCGACGCGCTCGTGCGCGACCTCTCCGAGCTCAAGATCGGCGACCCCGTCGTGCACGTCAACCACGGCATCGGACGCTATCGCGGCCTCGTCAACATCGACGTCTCGGGCGGGCAGGACGGCGGCGCGAGCGAGTTCCTGCACCTGCAGTACGCCGATGATGCGACGCTGTACGTGCCGGTTTCGCAGCTGCACCTGATCGGCCGCTACACCGGCGTCTCGCCCGAGGAGGCGCCGCTGCACAAGCTCGGCAGCGGGCAGTGGGAGCGCGCGCGGCGCAAGGCCGCCGAGCAGGTGCGCGACACCGCGGCCGAGCTGCTCAACCTCTACGCGCAGCGGGCGGCGCGCGAAGGCCGGCCGCACCGCTTCAGCGCCTCCGACTACGAGGCCTTCGCCGCCAGCTTCGGCTTCGAGGAGACGGCCGACCAGCGCGCGGCGATCCACGCGGTGATCCAGGACCTCGTGAGCCCGCGCCCGATGGACCGGCTCGTCTGCGGCGACGTCGGTTTCGGCAAGACCGAGGTCGCGCTGCGCGCGGCCTTCGTCGCGGTGCACGGCGGCAGCCAGGTCGCGATCCTCGCGCCGACGACGCTGCTGGCCGAGCAGCACTACCAGACGCTCTGCGACCGCTTCGGCAAGTGGCCGGTGAAGATCGCCGAGCTCTCGCGCTTTCGCAGCAGCAAGGAGGTCAAGGCGGCACTCGAAGGCATCGCCGACGGCAGCGTCGACATCGTCGTCGGCACGCACAAGCTGCTCTCGCCCGAGGTGAAGTTCAAGCGCCTGGGCCTGCTCGTGATCGACGAGGAGCACCGCTTCGGCGTGCGCCACAAGGAGGCGATCAAGGCGCTGCGCGCCGAGGTCGACGTGCTGACGCTCACCGCGACGCCGATCCCGCGGACGCTCGGCATGGCGCTCGAGGGCCTGCGCGACCTCTCGGTGATCGCCACCGCGCCCGAGCGGCGCCTGGCGATCAAGACCTTCGTGCGCAACGAGGGCAGCGGCGTCATCCGCGAGGCGGTGCTGCGCGAGTTGAAGCGCGGCGGGCAGGTCTACTTCCTGCACAACGAGGTCGAGACCATCGAGCAGCGCGCGCAGCGGCTCTACGAACTGCTGCCCGAGGCGCGCATCGCGATCGCGCACGGCCAGATGCCCGAGCGCCAGCTCGAGGCGGTGATGCGCGATTTCGTCGCCCAGCGCTTCAACGTCCTCGTCTGCTCGACGATCATCGAGACCGGCATCGACGTTCCCAGCGCCAACACCATCGTCATCACCCGTGCCGACAAGTTCGGCCTCGCGCAGCTGCACCAGCTGCGCGGGCGCGTCGGCCGCAGCCACCACCAGGCCTACGCCTACCTGCTCGTCCCCGACGTGCAGAGCCTGACCAAGCAGGCCGGCCAGCGCCTGCAGGCGATCCAGGAGATGGAGGAGCTGGGCAGCGGCTTCTACCTCGCGATGCACGACCTCGAGATCCGCGGCGCGGGCGAGGTGCTCGGCGAGAGCCAGAGCGGCAACATGATGGAGGTCGGCTTCCAGCTCTACAACGACATGCTGGCCGAGGCGGTGCGCAGCCTCAAGGCCGGGCGCGAACCCGACCTGCTCTCGCCGATGGGCTCGCTCTTCGGGGCGACCACCGAGGTCAACCTGCACACGCCGGCGCTGCTGCCCGACGCGTACTGCGACGACGTCCACGCCCGGCTGAGCCTCTACAAGCGCCTGGCCAGCGCCGACAGCGCCGAGGCGCTCGACCGGCTGCTCGAGGAGGTCACCGACCGCTTCGGCAAGCTCCCGCCCCAGGGCCAGGCGCTCTTCGACACGCATCGCCTGCGCGTGCTCGCGAGGCCCTACGGCGTGCAGAAGATCGAGGCGGGCCCGAAGCTGATGAGCATCGCCTTCCGGCCCAACCCGCCGGTCGACGCGCAGCGCATCATCGCGCTGGTGCAGAAGAACCGCTCGGTCAAGCTCGCCGGCAACGACAAGCTGCGCATCGAGCGCGAGTTCGCCGCGGTCTCGGACCGCGTGCAGTACGTGCGCGACGTGCTGCGTGCGCTCGGTCCGCCGCTGGTCGAGGCCTGA
PROTEIN sequence
Length: 1171
MQLPSIAPGKRYTRPLPPGSADALLLARQAAAAKAAGRMLAVITADAADAARLVDEIVFFDPALRTALFPDWETLPYDSFSPHQDLVSERLATLWRVGHAEVDVLLLPASTALTRLAPPSFLAATTFMFRQKARLDEAALKAQLTLAGYQHVSQVVSPGEYAVRGGLIDLFPMGSPVPYRLDLFDDEIDSIRSFDPDTQRSLYPVPEVRLLPGREFPMDEAARTAFRARWREQLEGDPTRSRIYKDIQQGVASGGIEYYLPLFFDETATIFEHLPAGANLTLHGEVDGALQRFWSDTRERHRFLQHDPERPILPPEAIFLRPEEFFARTQPLATLVLRPTAPAADATDTTEADPASAWTRPLPPLAIDRGATEPLAALARHLETTTHRVLLVAESEGRRESVLELLREHRIQLPSVATLADFLAGNEKVAIVAAPLAAGFHWIETQGPQAGVSVQFVTETELFAATPQARRRRRQEQVSDLDALVRDLSELKIGDPVVHVNHGIGRYRGLVNIDVSGGQDGGASEFLHLQYADDATLYVPVSQLHLIGRYTGVSPEEAPLHKLGSGQWERARRKAAEQVRDTAAELLNLYAQRAAREGRPHRFSASDYEAFAASFGFEETADQRAAIHAVIQDLVSPRPMDRLVCGDVGFGKTEVALRAAFVAVHGGSQVAILAPTTLLAEQHYQTLCDRFGKWPVKIAELSRFRSSKEVKAALEGIADGSVDIVVGTHKLLSPEVKFKRLGLLVIDEEHRFGVRHKEAIKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPERRLAIKTFVRNEGSGVIREAVLRELKRGGQVYFLHNEVETIEQRAQRLYELLPEARIAIAHGQMPERQLEAVMRDFVAQRFNVLVCSTIIETGIDVPSANTIVITRADKFGLAQLHQLRGRVGRSHHQAYAYLLVPDVQSLTKQAGQRLQAIQEMEELGSGFYLAMHDLEIRGAGEVLGESQSGNMMEVGFQLYNDMLAEAVRSLKAGREPDLLSPMGSLFGATTEVNLHTPALLPDAYCDDVHARLSLYKRLASADSAEALDRLLEEVTDRFGKLPPQGQALFDTHRLRVLARPYGVQKIEAGPKLMSIAFRPNPPVDAQRIIALVQKNRSVKLAGNDKLRIEREFAAVSDRVQYVRDVLRALGPPLVEA*