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anamox1_curated_scaffold_1347

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1347_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..436
DNA (435bp) protein (145aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
isopropylmalate isomerase Tax=Acidovorax radicis RepID=UPI0002376A23
Tax=GWA2_Burkholderiales_64_37_curated
anamox1_curated_scaffold_1347_2
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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451..1101
DNA (651bp) protein (217aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLX9_9BURK
anamox1_curated_scaffold_1347_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1131..2225
DNA (1095bp) protein (365aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQW4_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1347_4
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2329..3483
DNA (1155bp) protein (385aa)
asd; aspartate-semialdehyde dehydrogenase Asd (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase Tax=Ideonella sp. B508-1 RepID=UPI000346F2A1
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_1347_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3763..6288
DNA (2526bp) protein (842aa)
LysM domain protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNK5_RUBGI
LysM domain-containing protein
LysM domain protein {ECO:0000313|EMBL:BAL94592.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1347_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6281..7093
DNA (813bp) protein (271aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
truA; tRNA pseudouridine synthase A TruA (EC:5.4.99.12)
tRNA pseudouridine synthase A Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKJ7_9BURK
anamox1_curated_scaffold_1347_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7094..7729
DNA (636bp) protein (212aa)
trpF; N-(5'-phosphoribosyl) anthranilate isomerase TrpF (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNK7_RUBGI
anamox1_curated_scaffold_1347_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7775..9019
DNA (1245bp) protein (415aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
trpB; tryptophan synthase subunit beta TrpB (EC:4.2.1.20)
Tryptophan synthase beta chain Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQV8_9BURK
anamox1_curated_scaffold_1347_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9016..9846
DNA (831bp) protein (277aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
trpA; tryptophan synthase subunit alpha TrpA (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKJ4_9BURK
anamox1_curated_scaffold_1347_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9843..10715
DNA (873bp) protein (291aa)
accD; acetyl-CoA carboxylase carboxyl transferase subunit beta AccD (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNL0_RUBGI
anamox1_curated_scaffold_1347_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10795..12075
DNA (1281bp) protein (427aa)
folC; bifunctional folylpolyglutamate synthase and dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
FolC bifunctional protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKJ2_9BURK
FolC bifunctional protein {ECO:0000313|EMBL:EGJ08860.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1347_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12110..12880
DNA (771bp) protein (257aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003662122
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:AFU46456.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
anamox1_curated_scaffold_1347_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12880..13377
DNA (498bp) protein (166aa)
Putative membrane protein, required for colicin V production Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQV3_9BURK
cvpA; membrane protein, required for colicin V production CvpA
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1347_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13388..14899
DNA (1512bp) protein (504aa)
purF; amidophosphoribosyltransferase PurF (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
amidophosphoribosyltransferase Tax=Ideonella sp. B508-1 RepID=UPI000347BDE6
anamox1_curated_scaffold_1347_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14896..16146
DNA (1251bp) protein (417aa)
O-succinylhomoserine sulfhydrylase (EC:4.4.1.1)
O-succinylhomoserine sulfhydrylase Tax=Variovorax paradoxus RepID=UPI00035F6F7E
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
anamox1_curated_scaffold_1347_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16155..17579
DNA (1425bp) protein (475aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Glutamate--tRNA ligase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQV0_9BURK
anamox1_curated_scaffold_1347_trna_1
unknown

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17657..17735
DNA (79bp)
transferRNA Ala
anamox1_curated_scaffold_1347_trna_2
unknown

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17776..17848
DNA (73bp)
transferRNA Glu
anamox1_curated_scaffold_1347_trna_3
unknown

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17913..17986
DNA (74bp)
transferRNA Asp
anamox1_curated_scaffold_1347_17
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18202..18522)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVF1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12319.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
anamox1_curated_scaffold_1347_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18672..19196)
DNA (525bp) protein (175aa)
putative methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein Tax=Dialister invisus DSM 15470 RepID=C9LMD6_9FIRM
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1347_19
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19193..20650)
DNA (1458bp) protein (486aa)
ada_alkA; DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA (EC:2.1.1.63)
DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA {ECO:0000313|EMBL:BAL96850.1}; EC=2.1.1.63 {ECO:0000313|EMBL:BAL96850.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
DNA-O6-methylguanine-protein-cysteine S-methyltransferase/DNA-3-methyladenine glycosylase Ada/AlkA Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV13_RUBGI
anamox1_curated_scaffold_1347_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20778..22181
DNA (1404bp) protein (468aa)
algC; phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVE6_9BURK
Phosphomannomutase {ECO:0000313|EMBL:EGJ12314.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1347_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22240..23526
DNA (1287bp) protein (429aa)
waaA; 3-deoxy-D-manno-octulosonic-acid transferase (EC:2.-.-.-)
Putative 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVE5_9BURK
Putative 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein {ECO:0000313|EMBL:EGJ12313.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1347_22
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23564..23992
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y365_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG91152.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
anamox1_curated_scaffold_1347_23
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24027..25847
DNA (1821bp) protein (607aa)
NADH-quinone oxidoreductase subunit 1 {ECO:0000313|EMBL:EWS61296.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EWS61296.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
NADH dehydrogenase (quinone) (EC:1.6.5.3)
NADH dehydrogenase (Quinone) Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCL1_METPP
anamox1_curated_scaffold_1347_24
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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25844..28660
DNA (2817bp) protein (939aa)
Tugsten containing formate dehydrogenase alpha subunit 2Fe-2S ferredoxin N-term domain {ECO:0000313|EMBL:CAQ72090.1}; EC=1.2.1.2 {ECO:0000313|EMBL:CAQ72090.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
fdwA; tugsten containing formate dehydrogenase alpha subunit; 2fe-2S ferredoxin n-term domain (EC:1.2.1.2)
Tugsten containing formate dehydrogenase alpha subunit 2Fe-2S ferredoxin N-term domain Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RB15_CUPTR
anamox1_curated_scaffold_1347_25
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28747..29607)
DNA (861bp) protein (287aa)
2,3-dimethylmalate lyase Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAT6_ACIET
2,3-dimethylmalate lyase
2,3-dimethylmalate lyase {ECO:0000313|EMBL:ACM33537.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 28 items

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