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anamox1_curated_scaffold_267

Search features with annotation key words

Displaying items 31-60 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_267_31
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38352..39281)
DNA (930bp) protein (310aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
Ornithine carbamoyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM41_9BURK
anamox1_curated_scaffold_267_32
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39278..40489)
DNA (1212bp) protein (404aa)
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Acetylornithine aminotransferase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNT7_RUBGI
anamox1_curated_scaffold_267_33
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(40688..40993)
DNA (306bp) protein (102aa)
30S ribosomal protein S20 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM38_9BURK
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
rpsT; 30S ribosomal protein S20
anamox1_curated_scaffold_267_34
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41108..42715
DNA (1608bp) protein (536aa)
Integral membrane protein MviN Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR31_9BURK
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
mviN; integral membrane protein MviN
anamox1_curated_scaffold_267_35
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42883..43551
DNA (669bp) protein (223aa)
DnaA-homolog protein Hda Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU2_RUBGI
hda; DnaA-like protein Hda
DnaA-homolog protein Hda {ECO:0000313|EMBL:BAL94679.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_267_36
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43580..44248
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR28_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10796.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative phosphatase
anamox1_curated_scaffold_267_37
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44245..45831
DNA (1587bp) protein (529aa)
pcnB; poly(A) polymerase PcnB (EC:2.7.7.19)
Poly(A) polymerase (Fragment) Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LR27_9BURK
Poly(A) polymerase {ECO:0000313|EMBL:EGJ10795.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_267_38
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46006..46653
DNA (648bp) protein (216aa)
Phosphate transport regulator related to PhoU Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM29_9BURK
Phosphate transport regulator related to PhoU {ECO:0000313|EMBL:EHR71914.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
anamox1_curated_scaffold_267_39
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46684..47694
DNA (1011bp) protein (337aa)
Putative low-affinity inorganic phosphate transporter Pit Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNU8_RUBGI
pit; putative low-affinity inorganic phosphate transporter Pit
Putative low-affinity inorganic phosphate transporter Pit {ECO:0000313|EMBL:BAL94685.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_267_40
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47710..48141)
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM27_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_267_41
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


48364..48615
DNA (252bp) protein (84aa)
30S ribosomal protein S16 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV1_RUBGI
rpsP; 30S ribosomal protein S16
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_267_42
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48638..49285
DNA (648bp) protein (216aa)
Ribosome maturation factor RimM Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN31_9BURK
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
rimM; 16S rRNA processing protein RimM
anamox1_curated_scaffold_267_43
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49300..50067
DNA (768bp) protein (256aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM24_9BURK
trmD; tRNA (guanine-N1-)-methyltransferase TrmD
anamox1_curated_scaffold_267_44
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


50154..50507
DNA (354bp) protein (118aa)
50S ribosomal protein L19 Tax=Ideonella sp. B508-1 RepID=UPI000346EFB6
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
anamox1_curated_scaffold_267_45
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50700..51401
DNA (702bp) protein (234aa)
NTP pyrophosphohydrolase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM22_9BURK
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EHR71907.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
NUDIX hydrolase
anamox1_curated_scaffold_267_46
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51439..52428
DNA (990bp) protein (330aa)
cbiB; cobalamin biosynthesis protein CbiB (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV6_RUBGI
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_267_47
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52495..53439)
DNA (945bp) protein (315aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Putative ribosome biogenesis GTPase RsgA Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN36_9BURK
anamox1_curated_scaffold_267_48
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53436..54734)
DNA (1299bp) protein (433aa)
Ste24 endopeptidase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LN37_9BURK
putative M48A family peptidase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_267_49
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54787..55347
DNA (561bp) protein (187aa)
orn; oligoribonuclease Orn (EC:3.1.-.-)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Oligoribonuclease Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HNV9_RUBGI
anamox1_curated_scaffold_267_50
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55395..56723)
DNA (1329bp) protein (443aa)
TolC family type I secretion outer membrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVE4_9BURK
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EGJ12312.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
TolC family type I secretion outer membrane protein
anamox1_curated_scaffold_267_51
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56771..57445)
DNA (675bp) protein (225aa)
pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase Pcm (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase Pcm {ECO:0000313|EMBL:BAL96845.1}; EC=2.1.1.77 {ECO:0000313|EMBL:BAL96845.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Protein-L-isoaspartate(D-aspartate) O-methyltransferase Pcm Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV08_RUBGI
anamox1_curated_scaffold_267_52
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57488..60640)
DNA (3153bp) protein (1051aa)
Nodulation protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEL5_METPP
Nodulation protein {ECO:0000313|EMBL:ABM94004.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
nodulation protein
anamox1_curated_scaffold_267_53
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60656..61855)
DNA (1200bp) protein (400aa)
Nodulation protein NolF Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEL6_METPP
nodulation protein NolF
Nodulation protein NolF {ECO:0000313|EMBL:ABM94005.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_267_54
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61852..62499)
DNA (648bp) protein (216aa)
Transcriptional regulator, TetR family Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEL7_METPP
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABM94006.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_267_55
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62672..63529
DNA (858bp) protein (286aa)
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Undecaprenyl-diphosphatase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HV05_RUBGI
anamox1_curated_scaffold_267_56
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63513..64211)
DNA (699bp) protein (233aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVE0_9BURK
anamox1_curated_scaffold_267_trna_1
unknown

Not on your lists

64424..64494
DNA (71bp)
transferRNA Gly
anamox1_curated_scaffold_267_57
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64737..66587
DNA (1851bp) protein (617aa)
Site-specific recombinase, phage integrase family Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4RZ41_9BURK
Integrase family protein {ECO:0000313|EMBL:ACS61998.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
integrase family protein
anamox1_curated_scaffold_267_58
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66661..68415)
DNA (1755bp) protein (585aa)
Relaxase Tax=Thauera sp. 63 RepID=N6YGT7_9RHOO
Relaxase {ECO:0000313|EMBL:ENO79194.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
Relaxase
anamox1_curated_scaffold_267_59
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68703..69623)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X3G5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF78628.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
hypothetical protein
Displaying items 31-60 of 97 in total

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