ggKbase home page

anamox1_curated_scaffold_400

Search features with annotation key words

Displaying items 31-46 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_400_31
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31232..31783)
DNA (552bp) protein (184aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase Tax=Oceanimonas sp. (strain GK1) RepID=H2FW44_OCESG
3-hydroxydecanoyl-ACP dehydratase
anamox1_curated_scaffold_400_32
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31956..32852)
DNA (897bp) protein (299aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00036ED0C0
EamA-like transporter family protein {ECO:0000313|EMBL:EWS58189.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
transmembrane protein
anamox1_curated_scaffold_400_33
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32913..34073
DNA (1161bp) protein (387aa)
Putative acyl-CoA transferase/carnitine dehydratase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUT9_9BURK
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EHR69649.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
L-carnitine dehydratase/bile acid-inducible protein F
anamox1_curated_scaffold_400_34
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34070..35761
DNA (1692bp) protein (564aa)
NUDIX hydrolase:Beta-lactamase-like protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKV8_9BURK
NUDIX hydrolase:Beta-lactamase-like protein {ECO:0000313|EMBL:EGJ08976.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative hydrolase
anamox1_curated_scaffold_400_35
unknown

Not on your lists

35863..36156
DNA (294bp) protein (98aa)

This feature has no annotations

anamox1_curated_scaffold_400_36
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36424..37161)
DNA (738bp) protein (246aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
arginyl-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKV9_9BURK
anamox1_curated_scaffold_400_37
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37158..37931)
DNA (774bp) protein (258aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKW0_9BURK
anamox1_curated_scaffold_400_38
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37957..40044)
DNA (2088bp) protein (696aa)
Prolyl oligopeptidase family protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKW1_9BURK
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EGJ08979.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative S9A family peptidase
anamox1_curated_scaffold_400_39
unknown

Not on your lists

comp(40122..40361)
DNA (240bp) protein (80aa)

This feature has no annotations

anamox1_curated_scaffold_400_40
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40523..41158
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCB4_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93203.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
anamox1_curated_scaffold_400_41
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41181..42935
DNA (1755bp) protein (585aa)
Subtilisin-like serine protease Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTS2_9BURK
peptidase S8/S53 subtilisin kexin sedolisin
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_400_42
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43042..45114
DNA (2073bp) protein (691aa)
dcp; peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Peptidyl-dipeptidase Dcp Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKW4_9BURK
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:EGJ08982.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_400_43
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45140..46504)
DNA (1365bp) protein (455aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Tryptophan synthase beta chain Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WR88_9BURK
predicted alternative tryptophan synthase beta-subunit
anamox1_curated_scaffold_400_44
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46688..47635)
DNA (948bp) protein (316aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKP2_SYNFM
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
anamox1_curated_scaffold_400_45
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47707..51210)
DNA (3504bp) protein (1168aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
Transcription-repair-coupling factor Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLW7_9BURK
mfd; transcription-repair-coupling factor
anamox1_curated_scaffold_400_46
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51263..51907
DNA (645bp) protein (215aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI00036BB389
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
Displaying items 31-46 of 46 in total

View Taxonomy