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anamox1_curated_scaffold_1748

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1748_1
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(381..1868)
DNA (1488bp) protein (496aa)
hypothetical protein Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037B18F5
Uncharacterized protein {ECO:0000313|EMBL:ELX11561.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
uncharacterised BCR, COG1649 family protein
anamox1_curated_scaffold_1748_2
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1865..3136)
DNA (1272bp) protein (424aa)
beta-lactamase Tax=Janthinobacterium sp. CG3 RepID=UPI0003478F48
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDG80692.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
anamox1_curated_scaffold_1748_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3133..4020)
DNA (888bp) protein (296aa)
N-acetylmuramic acid-6-phosphate etherase Tax=Janthinobacterium sp. CG3 RepID=UPI0003465616
murQ; N-acetylmuramic acid 6-phosphate etherase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1748_4
unknown

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4102..4233
DNA (132bp) protein (44aa)

This feature has no annotations

anamox1_curated_scaffold_1748_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4265..6271)
DNA (2007bp) protein (669aa)
Putative site-specific recombinase transmembrane protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLT7_9BURK
Putative site-specific recombinase transmembrane protein {ECO:0000313|EMBL:EGJ09305.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
putative site-specific recombinase
anamox1_curated_scaffold_1748_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6279..6653)
DNA (375bp) protein (125aa)
Protein ApaG Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKV1_RUBGI
apaG; protein apaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_1748_7
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6692..7354
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
cbbE; ribulose-5-phosphate 3-epimerase CbbE (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLT5_9BURK
anamox1_curated_scaffold_1748_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7388..7969
DNA (582bp) protein (194aa)
Restriction endonuclease Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y612_LEPCP
restriction endonuclease
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1748_9
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8013..9113
DNA (1101bp) protein (367aa)
saccharopine dehydrogenase, NAD-binding (EC:1.5.1.7)
Saccharopine dehydrogenase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLS1_9BURK
Saccharopine dehydrogenase {ECO:0000313|EMBL:EGJ09289.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
anamox1_curated_scaffold_1748_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9559..10269
DNA (711bp) protein (237aa)
Glutathione S-transferase (Glutathione transferase)-like protein bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
glutathione S-transferase family protein
Tax=GWE1_Burkholderiales_65_30_curated
anamox1_curated_scaffold_1748_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10262..10972
DNA (711bp) protein (237aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
2-phosphoglycolate phosphatase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVC6_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_1748_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11235..12710
DNA (1476bp) protein (492aa)
trpE; anthranilate synthase component I TrpE (EC:4.1.3.27)
Anthranilate synthase component I Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVC8_9BURK
Anthranilate synthase component I {ECO:0000313|EMBL:EHR69234.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
anamox1_curated_scaffold_1748_13
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12748..17055
DNA (4308bp) protein (1436aa)
SNF2-related:Helicase, C-terminal (Modular protein) Tax=mine drainage metagenome RepID=E6QE06_9ZZZZ
Superfamily II DNA/RNA helicase, SNF2 family
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG18063.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
anamox1_curated_scaffold_1748_14
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17090..17275)
DNA (186bp) protein (62aa)
Tax=CG_Delta_07
anamox1_curated_scaffold_1748_15
unknown

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comp(17242..17613)
DNA (372bp) protein (124aa)

This feature has no annotations

anamox1_curated_scaffold_1748_16

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comp(17810..18214)
DNA (405bp) protein (135aa)
Protein containing PilT protein Tax=mine drainage metagenome RepID=T0ZS27_9ZZZZ
Protein containing PilT protein {ECO:0000313|EMBL:EQD32630.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
twitching motility protein PilT
anamox1_curated_scaffold_1748_17

Not on your lists

comp(18211..18417)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T0YLZ1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD32631.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
anamox1_curated_scaffold_1748_18
unknown

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comp(18547..18651)
DNA (105bp) protein (35aa)

This feature has no annotations

anamox1_curated_scaffold_1748_19
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18750..19934
DNA (1185bp) protein (395aa)
ATPase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3T8_GEODF
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EXI89881.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
ATPase
anamox1_curated_scaffold_1748_20
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20757..21347
DNA (591bp) protein (197aa)
trpG; anthranilate synthase component II TrpG (EC:4.1.3.27)
Anthranilate synthase component II TrpG {ECO:0000313|EMBL:BAL93654.1}; EC=4.1.3.27 {ECO:0000313|EMBL:BAL93654.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Anthranilate synthase component II TrpG Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HKW7_RUBGI
anamox1_curated_scaffold_1748_21
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21379..22416
DNA (1038bp) protein (346aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVD4_9BURK
anamox1_curated_scaffold_1748_22
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22434..23225
DNA (792bp) protein (264aa)
trpC; indole-3-glycerol phosphate synthase TrpC (EC:4.1.1.48)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003759867
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_1748_trna_1
unknown

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23288..23370
DNA (83bp)
transferRNA Tyr
anamox1_curated_scaffold_1748_trna_2
unknown

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23403..23473
DNA (71bp)
transferRNA Gly
anamox1_curated_scaffold_1748_trna_3
unknown

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23582..23653
DNA (72bp)
transferRNA Thr
anamox1_curated_scaffold_1748_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23728..24123
DNA (396bp) protein (132aa)
Elongation factor Tu Tax=Alicycliphilus denitrificans RepID=E8TVH5_ALIDB
translation elongation factor tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Displaying 26 items

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