ggKbase home page

anamox1_curated_scaffold_420

Search features with annotation key words

Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_420_31
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27477..27746)
DNA (270bp) protein (90aa)
purE; 5-(carboxyamino)imidazole ribonucleotide mutase PurE (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLC6_RUBGI
anamox1_curated_scaffold_420_32
unknown

Not on your lists

comp(28004..29191)
DNA (1188bp) protein (396aa)

This feature has no annotations

anamox1_curated_scaffold_420_33
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29528..29947
DNA (420bp) protein (140aa)
SWIB domain-containing protein possibly involved in chromatin remodeling Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKX7_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_420_34
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30073..31137)
DNA (1065bp) protein (355aa)
fbaA; FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN (EC:4.1.2.13)
FRUCTOSE-BISPHOSPHATE ALDOLASE PROTEIN Tax=Ralstonia RepID=D8NY84_RALSL
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
anamox1_curated_scaffold_420_35
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31365..32384
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=Oxalobacter formigenes OXCC13 RepID=C3X8U3_OXAFO
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_420_36
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32422..33858)
DNA (1437bp) protein (479aa)
pykF; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Pyruvate kinase Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCG3_METPP
anamox1_curated_scaffold_420_37
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33936..36275)
DNA (2340bp) protein (780aa)
malic enzyme (EC:1.1.1.40 2.3.1.8)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWA7_LEPCP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_420_38
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36335..37528)
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNI9_9BURK
anamox1_curated_scaffold_420_39
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37602..37955)
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKT7_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
anamox1_curated_scaffold_420_40
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38033..39016)
DNA (984bp) protein (328aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
fmt; methionyl-tRNA formyltransferase Fmt (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNI4_9BURK
anamox1_curated_scaffold_420_41
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39009..39524)
DNA (516bp) protein (172aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKT4_9BURK
anamox1_curated_scaffold_420_42
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39857..41002
DNA (1146bp) protein (382aa)
Putative signal peptide protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNI2_9BURK
Putative signal peptide protein {ECO:0000313|EMBL:EGJ09900.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
LysM domain-containing protein
anamox1_curated_scaffold_420_43
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41034..42176
DNA (1143bp) protein (381aa)
Protein Smf Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLB2_RUBGI
smf; protein Smf
Protein Smf {ECO:0000313|EMBL:BAL93799.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
anamox1_curated_scaffold_420_44
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42226..42678
DNA (453bp) protein (151aa)
Protein Smg homolog Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKT1_9BURK
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
smg; protein smg
anamox1_curated_scaffold_420_45
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42703..45054)
DNA (2352bp) protein (784aa)
Uncharacterized protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLB0_RUBGI
Uncharacterized protein {ECO:0000313|EMBL:BAL93797.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
hypothetical protein
anamox1_curated_scaffold_420_46
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45104..46135)
DNA (1032bp) protein (344aa)
Protein-export membrane protein SecF Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNH9_9BURK
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
secF; preprotein translocase subunit SecF
anamox1_curated_scaffold_420_47
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46148..48028)
DNA (1881bp) protein (627aa)
Protein translocase subunit SecD Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNH8_9BURK
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
secD; preprotein translocase subunit SecD
anamox1_curated_scaffold_420_48
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48112..48450)
DNA (339bp) protein (113aa)
Protein translocase subunit yajC Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCE9_METPP
protein translocase subunit yajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:EWS61457.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
anamox1_curated_scaffold_420_49
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48520..49038)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Thauera sp. 63 RepID=N6XFK8_9RHOO
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying items 31-49 of 49 in total

View Taxonomy