ggKbase home page

anamox1_curated_scaffold_1343_25

Organism: anamox1_Burkholderiales_71_17_curated

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(22311..22622)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 87.0
  • Bit_score: 94
  • Evalue 7.10e-17
DNA-binding protein Tax=Ideonella sp. B508-1 RepID=UPI00034959B1 similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 87.0
  • Bit_score: 98
  • Evalue 2.70e-18
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 87.0
  • Bit_score: 94
  • Evalue 1.40e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylibium sp. T29 → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGATCGCGGTCGACACCTCGGTGCTGGTCGACTACATCGGCGACGGTCCGGGTGCCGAAGCAGCCGAAGAGGCCTTGCGCGCGGCGCTGACCGCGGGCCCGCTGGTGATCTGCGAGGTGGTGCTCAGCGAGGTCGTCGCCGGCCTCGGCCACGGCGACATCGTGACCGAGACGCTGGATGCGATCGGCATCGGCTTCTCGGCACTCGAACAACGGGCCGCCGTGCGAGCGGGCGAGATGCACCGCCGCTACACGGAACGCCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCTTCAGTGCCGGGCCCTGA
PROTEIN sequence
Length: 104
MIAVDTSVLVDYIGDGPGAEAAEEALRAALTAGPLVICEVVLSEVVAGLGHGDIVTETLDAIGIGFSALEQRAAVRAGEMHRRYTERXXXXXXXXXXXFSAGP*