ggKbase home page

anamox1_curated_scaffold_1004_28

Organism: anamox1_Burkholderiales_71_17_curated

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 12 / 38
Location: comp(25402..27141)

Top 3 Functional Annotations

Value Algorithm Source
rne; ribonuclease E (EC:3.1.26.12) similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 629.0
  • Bit_score: 595
  • Evalue 8.60e-168
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 629.0
  • Bit_score: 595
  • Evalue 4.20e-167
Ribonuclease E Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWP1_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 629.0
  • Bit_score: 595
  • Evalue 3.00e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGGACGAGAGCAAGAACCGGCGCGAGGTCGAACAGCGGCTGCGCGACGCGCTGCGCAACGACCGCGCGCGCGTGCAGTTCAGCTCGATCAGCAAGTTCGGCCTGCTCGAACTCAGCCGCCAGCGCCTGCGCCCGGCCCTCTCCGAAGGCAACCACATCACCTGCCCGCGCTGCAACGGCACCGGCCACATCCGCGACACCGAGAGCAGCGCGCTGCAGATCCTGCGCATGGTGCAGGAGGAGGCGATGAAGGACAACACCGCCGCCGTGCACGTGCAGGTGCCGGTGGAGGTGACCTCCTTCCTGCTCAACGAGAAGCGCACCGAGATCACGAAGATCGAGCTCAAGCAGCGCGTCACCATCCTGCTCGTGCCCAACAAGCACCTGGAGACGCCCAACTACAAGCTCGAACGCCTGCGCCACGACGACCCGCGGCTGGAGAACCTGCAGGCCAGCTACACCATGATCGAGGAGCTCGACGACGAAGTCGACGTGACGCGGCGCGAGAAGGTCAAGGCGCGGCAGGAGCCGGTGATCAAGGGCGTGCTGCCCGATCAACCCGCACCGACGCCGCCGGCCCCGGCGCCGGCAACGCCCGAGCCCGCCGTTCCGATCACGGCCGCGCCGCCGGCCGCGCCCGCCGCGTCGGGCGCCGGCTTCTTCTCCTGGCTACGCAAGCTCTTCGGCGTCGCGCCCGCGGTGCCGACACCGGCCGCGCCGCCGGCCGCGGCCGTGCCGGCTGCAGCCGCGCCAGAAAAGCCGCGCGAAGGCCGCGAAGGCCGCGATGGTCGCGATGGTCGCGAAGGCCGTCGCGGCGAACGTGGCAGCCGCAGTGACCGCAGCGAACGCGGCACGCGCGGACGAGACGGGCACGGCGAGGGACGCGGCAGCGGCCGCGCCGAGGCGCGCAGCGGTGAGGCGCGCAGCGGCGGGGAGCGCGGCGGGCGACGCGGCGGGCGCAATGAGCAGCGGCCGGATGGGGAGGGCCGGCAAGGCCGCGGCGGCGCCGCGACGCCACCGCCGGCGGCCGCGAGTGCCGAGGTCGATGCCACGCTGGCCGACACCTTGCCGCTGCCCGAATCCGCGTTGCCCCGATCCGAGGAGGGCGAGCGCAGCGGGCGTCGCCGCCGGCGCGGCGGCCGTGAGCGCGGCCAGCGGCGCGACGAGGGCCAGACGAGCGCCTCGGGCGATTCCGCCACGACCCCGGATGCCGGCGCGGCGATGCTCGCCACCGACTCCTTGGTCGCAGGCGACGATGCCGCCGCCGCATCGGCGGCGACGATGCGCACCGACGCGGCAGACGCGGCAGACGCGGACGAGAACGCGCGCAGCGCGCTTGCCGAGAGTCCCGAGGCACCGATCGGCCACGACGAGGGCCAGCGCGAGGGCGCGGCATCGCCACAAGCCGTGGCCGAGACAAGCGGTGATGCCCTCGCGGCGACGACCGCGCCCATGCCCGCGCCGCCGCAACCCGTCGCCGCGCCGATGGAGCCGTACAGTCTGCCCCTCGAGGCGCTGCGCGGACTGGCTGCAAGCGCAGGCCTGGAATGGGTCGGCAGCGATCCGGAGAAGATTCGTGCGGCCCAGGCGGCAATGGCGGCCGAACCGGTCGCAGCGCGCGTGACGCGCCAGCCGCGCGCTGCCGTGGTCATCGACGACGGGCCGCTGGTCCTCGTCGAAACGCGCAAGGACCTGTCCCAGCTGCGGCTGCCCTTCGACGCCGAGACCGGCCTGCGTTGA
PROTEIN sequence
Length: 580
MDESKNRREVEQRLRDALRNDRARVQFSSISKFGLLELSRQRLRPALSEGNHITCPRCNGTGHIRDTESSALQILRMVQEEAMKDNTAAVHVQVPVEVTSFLLNEKRTEITKIELKQRVTILLVPNKHLETPNYKLERLRHDDPRLENLQASYTMIEELDDEVDVTRREKVKARQEPVIKGVLPDQPAPTPPAPAPATPEPAVPITAAPPAAPAASGAGFFSWLRKLFGVAPAVPTPAAPPAAAVPAAAAPEKPREGREGRDGRDGREGRRGERGSRSDRSERGTRGRDGHGEGRGSGRAEARSGEARSGGERGGRRGGRNEQRPDGEGRQGRGGAATPPPAAASAEVDATLADTLPLPESALPRSEEGERSGRRRRRGGRERGQRRDEGQTSASGDSATTPDAGAAMLATDSLVAGDDAAAASAATMRTDAADAADADENARSALAESPEAPIGHDEGQREGAASPQAVAETSGDALAATTAPMPAPPQPVAAPMEPYSLPLEALRGLAASAGLEWVGSDPEKIRAAQAAMAAEPVAARVTRQPRAAVVIDDGPLVLVETRKDLSQLRLPFDAETGLR*