ggKbase home page
Advanced Search
Search Help

anamox1_curated_scaffold_3067_2

Organism: anamox1_Gemmatimonas_aurantiaca_57_6_curated

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 1073..5383

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 1436.0
  • Bit_score: 2617
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 1436.0
  • Bit_score: 2617
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 1436.0
  • Bit_score: 2617
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 4311
ATGATCGACTTCCGCAGTACGCGCGAAACCCGCGCTTCAGCGTTTGACTTCATGTCGGTTCGCATCGCTTCTGCCGAAGAGATTCGCGGACCCAAGGACCATAACGAGCGGCAGCGTCTCGAAATGGGCGGACTGCGCACGTGGTGGTCGTGGGGTGAGGTAACGAAGCCCGAGACCATCAACTATCGCTCGTTCAAACCGGAGAAGGACGGACTCTTTTGCGAACGCATTTTCGGACCCGTCAAGGACTGGGAGTGCCATTGCGGCAAGTACAAGCGCATTCGCTATCGCGGAGTGATCTGCGATCGCTGCGGCGTGGAAGTCACGCTCAGCAAGGTTCGTCGCGAGCGCATGGGGCACATCGAACTCGCTGTGCCCGTTGCGCACATCTGGTTCTTCAAGACGCTCCCGTCTCCGATGGGCAATCTTCTCGATGTTACGCTCCGCGATCTCGAGAAGGTCATCTATTACAGCAACTATATCGTTGTGGATCCTGGTGCTCAGGAGGTTCGTGAGCGTCAGCTTCTTGACGAAGATGAATACCTGACACTCAGACAGAAGGCGAAAGCCGAAGGCGATACCGCGTTCCAGTGCGATATCGGCGCACCGGCAGTTCGCGAGCTGCTCAAGCGCCTTGACGTGGACAAGATCGCTGAAGAGCTTCGCGCGTCTCTGGTGGGTGAAACGTCGCAGCATCGCAAGAAGCAGATGCTCAAGCGGCTCAAGATTGTCGATGCATTCAGGCTGTCAGGCGAAGGTGGTGAGATTCGCAATCGCCCCGAGTGGATGATCATGGACGTGATTCCGGTCATTCCACCGGATTTGCGCCCGCTGGTGCCGCTTGATGGCGGACGATTTGCCACGTCGGACTTGAACGATCTCTACCGCCGCGTGATCAACCGCAACAACCGCTTGCAGAAGCTCATCTCTCATCGCGCTCCCGAGGTGATCCTGCGCAATGAGAAGCGCATGCTTCAGGAAGCGGTGGATGCCTTGTTTGATAACGGTCGTCGGTCGAAGGCGATCCGTGGTCGCGGCAAGCGTCCGCTCAAGTCGCTCTCCGACATGCTCAAGGGCAAGCAGGGCAGGTTCCGTCAGAATCTGCTCGGTAAGAGAGTTGACTACTCGGGACGCTCGGTCATCGTCGTTGGCCCCGAACTCAAGCTTCATCAGTGCGGTTTGCCAAAGGCAATGGCGCTTGAGCTCTTCAAGCCGTTCATCATTCACAAGCTTGTTGAGAGTGGCGAGGCGTCGACAGTAAAGAGTGCCAAGAAGATCGTGGAGCGTGAAAACGCCATGGTCTATGAGGTGCTTGAGGACATCATCCGCGATCACCCGGTGCTCCTCAACCGCGCACCCACTCTGCACCGCCTGGGTATTCAGGCATTCGAGCCGGTGCTCGTTGAAGGAAAGGCCATCCGCATCCACCCGCTCGTCTGTGCGGCTTTCAATGCCGATTTCGACGGTGACCAGATGGCTGTGCACGTGCCATTGTCGTTCGAGGCTCAGATCGAAGCGCGCGTGCTCATGCTTTCGTCCAACAACATTCTCAAGCCTTCCGACGGCAGGCCGGTGGCGGAGCCCTCGCAGGACATCGTTCTGGGTTGCTATGTCGCTACCAAGGCGCCAACGGACTTCGACAGGAATGCCAAGGATCCGGCGTGGGTGAGCTCGCTTCCGGCTTTCACCGAGTTGGCTGAAGTCGAGATTGCCATTGCAAACGGACGCGCAACCCAGCAGACCGCCGTTCGCTGGCTCGACCGCCGTCAGGATCCGGCCGAGTGGATCGTAACGACAACCGGCAGAATCCTGTTCGATCAGATCGTCCCAGCTGGTCTTCCGTTCCTGAACAAGGACATGAAGAAGAAGGCACTCGGCGAGCTGGTATTTGACAGCTACCGTGAAGCCGGGCTTGCAGAGACGGTTGCACTGCTTGATCGCCTCAAGGAGTTCGGCTTCCGCAATGCTACTCGTGGCGGCGTATCAATTGGCATTGAGGATCTCCATATCCCGAAGGAAAAAGAGATCCTCCTTCGTGAGGCCACCGAGCGCGTGGAGCGCTTCCAGCGTGCCTACGCCACCGGCAACATCACGAACGGTGAGCGCTACAACAAAGTCATCGATACGTGGACTCACGCAAATACGGACGTTGCCGACGCAATGGTCAAGACGATGCGTGACTCACAGGGCGGCTTCAATCCGGTTTACATGATGTTCGATTCCGGATCGCGAGGCAGCCGCGATCAGATCAGACAGCTGGCGGGCATGCGCGGTCTCATGGCCAAGCCACAGAAGAAGCTGACAGGCGGCATCGGCGAGATCATTGAGAACCCGATCAAGTCGAACTTCCGTGAAGGTCTGTCTGTTCTAGAGTACTTCTCGTCCACTCACGGTGCACGAAAGGGTCTCGCCGACACTGCGCTGAAGACTGCCGATGCGGGTTATCTCACGCGCCGTCTCGTTGATGTCGCTCAGGATATGACCATTACCGAGGATGATTGCGGGACCATCCTCGGAATCGAAACATCGGCGCTCAAGGAAGGCGAAGATGTGATTCAGCCTCTCTCGGAGCGTCTGGTTGGCAACGTTGCTGCTGAAGATGTTCTCGACCCGATGGAAGTGGACGAAGCGGGCAGACCACGGCTGATAGTTGCCGCGGGCACGCTCATCACCGAGGACATGGTTCAGGGCATCGACGAGGCTGGTATCGAGTCCGTGAAGGTGCGCTCGGTGCTGACCTGCGAAGCCAAGCGTGGCATCTGCCGCAAGTGCTACGGCCGCAACATGGCCACCATGCAGATGGTTGATCCTGGCGAGGCAGTGGGCATTATCGCTGCCCAGTCAATTGGTGAGCCGGGAACCCAGCTGACTCTCCGTACGTTCCACGTTGGTGGTACTGCGTCGCGTATCGCCGAGCAAACGGCACGTACTACCAAGAAGGCTGGCGTCATCGAATATGGTGATCGTCTGTTCACTGTAATCAACAAGGAAGGTCAGCGAGTGGTGACCTCTTACGAGGGTGAACTGGTTATCCGCAGCTCCGCTGATCCGAGTGCCAGCATCGAAGCTCGTCTGCAGGTTCCGCTTGGTGCGTATCTGATGGTTGATGATGGACAGACCGTCAAGCGTGACGACACCGTTTTCACATGGGACCCGTATTCCAATCCCATCATTGCTGATGTCCAGGGAACGGTGCGGTTTGTTGACCTTGTCGAGGACGAGTCGCTTTCAGAAGAGCTGGACGAACTTACCGGCCTGCGTCAGCGCGTCGTGATTGAGGACCGTGAGAAGAAGCTGCATCCTCACATCGAGGTCTGGCAGACCAAGGGTGGCAGCGAGAAGCGCGTGCGCGACTTCATCCTGCCTGTCGGGGCGATCATCACAATCGATGATGGTGAGCAGATTTCAGCTGGAACGATACTCGCCAAGGTCAGCCGCGAGGCATACAAGACTCGTGATATCACGGGTGGTCTGCCACGCGTCGCAGAATTGTTTGAAGCCCGTCGTCCCAAGGATCCGGCAACAATTTCTGAGATCGATGGGTACGTGCGATTTGGCGACATCAAGCGCGGCAAGCGCGAGGTGTTTGTACGTCCTGCCACGATCGAGAAGGGTCAGTGGATAATTGACGAAACCGCAGATGAACAGGTTTACGAAGTGCCGTCCGGCAAGCACCTGAGAGTGCACGAAGGTGATCGCGTGCGCGCAGGTGACCGTATCTCGGAAGGCCCCGTCAATCCGCACGACATTCTCCGAATCAAGGGTCCACGCGCCGTTCAGGAGTATCTGCTCAACGAAGTGCAGCAGGTTTATCGCCTGCAGGGTGTGAAGATCAACGACAAGCACATTGGCGTGATCGTTCGGCAGATGCTTCAGAAGGTCCGCATTCTCGATTCGGGTGACACCGAGCTGCTTGAGGGAGAACATGTTGATCGTTCACAGTTCCGCGATGTGAACGACAACGCTCGCAAGAACAAGCAGCGGCCGGCTACGGCCGAACCTCTGCTTCTGGGAATCACCAAGGCATCATTGACAACACAGTCGTTTGTTTCCGCCGCATCATTCCAGGAAACGACGCGTGTGCTCACCGATGCAGCCATCAGAGGCTCGCGTGATGATCTCCTCGGGCTCAAGGAGAACATCATCATCGGACACCTCATCCCGGCCGGAACGGGCATGTACAGGTATCAGGAGGTTGATGTCGAGTCCGATGTCATTCCACCCAAGGAACCGTTGCCTGAAACTCAGGACTTCGGCTTTGACGCACTTCCTGCGTTCGAGCCGACGGCTTTCACCATGCCGGATGATTGA
PROTEIN sequence
Length: 1437
MIDFRSTRETRASAFDFMSVRIASAEEIRGPKDHNERQRLEMGGLRTWWSWGEVTKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICDRCGVEVTLSKVRRERMGHIELAVPVAHIWFFKTLPSPMGNLLDVTLRDLEKVIYYSNYIVVDPGAQEVRERQLLDEDEYLTLRQKAKAEGDTAFQCDIGAPAVRELLKRLDVDKIAEELRASLVGETSQHRKKQMLKRLKIVDAFRLSGEGGEIRNRPEWMIMDVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLQKLISHRAPEVILRNEKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKAMALELFKPFIIHKLVESGEASTVKSAKKIVERENAMVYEVLEDIIRDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMAVHVPLSFEAQIEARVLMLSSNNILKPSDGRPVAEPSQDIVLGCYVATKAPTDFDRNAKDPAWVSSLPAFTELAEVEIAIANGRATQQTAVRWLDRRQDPAEWIVTTTGRILFDQIVPAGLPFLNKDMKKKALGELVFDSYREAGLAETVALLDRLKEFGFRNATRGGVSIGIEDLHIPKEKEILLREATERVERFQRAYATGNITNGERYNKVIDTWTHANTDVADAMVKTMRDSQGGFNPVYMMFDSGSRGSRDQIRQLAGMRGLMAKPQKKLTGGIGEIIENPIKSNFREGLSVLEYFSSTHGARKGLADTALKTADAGYLTRRLVDVAQDMTITEDDCGTILGIETSALKEGEDVIQPLSERLVGNVAAEDVLDPMEVDEAGRPRLIVAAGTLITEDMVQGIDEAGIESVKVRSVLTCEAKRGICRKCYGRNMATMQMVDPGEAVGIIAAQSIGEPGTQLTLRTFHVGGTASRIAEQTARTTKKAGVIEYGDRLFTVINKEGQRVVTSYEGELVIRSSADPSASIEARLQVPLGAYLMVDDGQTVKRDDTVFTWDPYSNPIIADVQGTVRFVDLVEDESLSEELDELTGLRQRVVIEDREKKLHPHIEVWQTKGGSEKRVRDFILPVGAIITIDDGEQISAGTILAKVSREAYKTRDITGGLPRVAELFEARRPKDPATISEIDGYVRFGDIKRGKREVFVRPATIEKGQWIIDETADEQVYEVPSGKHLRVHEGDRVRAGDRISEGPVNPHDILRIKGPRAVQEYLLNEVQQVYRLQGVKINDKHIGVIVRQMLQKVRILDSGDTELLEGEHVDRSQFRDVNDNARKNKQRPATAEPLLLGITKASLTTQSFVSAASFQETTRVLTDAAIRGSRDDLLGLKENIIIGHLIPAGTGMYRYQEVDVESDVIPPKEPLPETQDFGFDALPAFEPTAFTMPDD*