ggKbase home page

anamox1_curated_scaffold_3997_4

Organism: anamox1_Gemmatimonas_aurantiaca_57_6_curated

near complete RP 47 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(2406..3161)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A543_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 250.0
  • Bit_score: 448
  • Evalue 4.40e-123
fliA; RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 250.0
  • Bit_score: 448
  • Evalue 1.30e-123
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 250.0
  • Bit_score: 448
  • Evalue 6.20e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 756
ATGAACAGCAAACTCTGGCAATCGTATCAGGCTGGAAATGAGACTGCTCGCAATCGCCTGCTTGAAGAGCATCTTGGCCTTGTACACCATGTGGCGAGGCAGATCTCGCGTACGCTCGCCGCACGTGCCGACTTTGACGAGCTGGTAAGCGCAGGCACAATGGGCCTGATGACTGCCCTCGAAGGTTTCGATGCAAGTCGTGGTCATGCATTCAGCACTTTTGCAGCTCCGCGCATTCGTGGCGCAATTCTCGATGAGCTGCGAAAGCAGGATCATGTGCCGCGGTCCATCAGAAGAAAGACGCGCGATATCACAGCGGCTCGCGAGTCCTTTCAACAGTCGCACGGACGTCCTCCCGAGGACCGGGAGCTTGCCGAAGCACTGAATGTTGACATGGAGACACTCTGGCGCTGGCAGGCCGATGTTGAAGGAGCGCATCACATCCCGCTTGATCGCGCTCCCGGTGAACGTGAGAACACGACTCCTGTTCCGGCAGAGGTTCTGACTGCAGAGGAAGAGGGAGGAGTTGAGGACTCACTCACTCACGAACAGGAGGTCGGCCACCTGCGTGATGCAATCCTGAAGTTGAAGGAGCAGGAGAGGATTGTTCTGTCGCTGTACTATTTCGAAGAGCTCAAACTGCACGAAATTGCGAAAGTTCTTGAGCTGACAGAGTCCAGGGTCTCGCAGATTCGCAGCAAGGCTCTGAGCAAGCTCCGCATTGATCTCAGGCCTCTTCGCGAACAGGTGATGTGA
PROTEIN sequence
Length: 252
MNSKLWQSYQAGNETARNRLLEEHLGLVHHVARQISRTLAARADFDELVSAGTMGLMTALEGFDASRGHAFSTFAAPRIRGAILDELRKQDHVPRSIRRKTRDITAARESFQQSHGRPPEDRELAEALNVDMETLWRWQADVEGAHHIPLDRAPGERENTTPVPAEVLTAEEEGGVEDSLTHEQEVGHLRDAILKLKEQERIVLSLYYFEELKLHEIAKVLELTESRVSQIRSKALSKLRIDLRPLREQVM*