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anamox1_Planctomycetia_64_8_curated

anamox1_Planctomycetia_64_1
In projects: anamox1  |  LAC_year1  |  LAC_reactor_startup

Consensus taxonomy: Planctomycetia  →  Planctomycetes  →  Bacteria

Metagenomic Context

Parent: anamox1_Planctomycetia_64_8 Manually curated genome
Original version: anamox1_Planctomycetia_64_8

Properties

Avg. coverage: 1.00 Longest contig: 35.63 Kbp Bin length: 4.14 Mbp GC content: 63.58 %
Contigs count: 783 Features count: 3420 rRNAs count: 0 tRNAs count: 20

Genome completeness

near complete RP 45 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 10 / 38 MC: 1
Displaying items 151-200 of 783 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
anamox1_curated_scaffold_5883
Domain: Bacteria (66.67%)
6 6023 bp 63.69 1.00 78.80
anamox1_curated_scaffold_6863
Order: Planctomycetales (50%)
6 5769 bp 62.26 1.00 72.44
anamox1_curated_scaffold_4345
Order: Planctomycetales (50%)
6 8566 bp 63.69 1.00 93.33
anamox1_curated_scaffold_2807
Species: Pirellula staleyi (50%)
6 11930 bp 66.92 1.00 91.91
anamox1_curated_scaffold_3402
Class: Planctomycetia (50%)
6 10233 bp 65.70 1.00 90.18
anamox1_curated_scaffold_3494
Class: Planctomycetia (83.33%)
6 10043 bp 63.12 1.00 78.98
anamox1_curated_scaffold_5728
Order: Planctomycetales (66.67%)
6 6784 bp 63.78 1.00 93.88
anamox1_curated_scaffold_5326
Class: Planctomycetia (50%)
6 7654 bp 63.85 1.00 65.89
anamox1_curated_scaffold_9105
Phylum: Planctomycetes (50%)
6 4423 bp 64.62 1.00 69.52
anamox1_curated_scaffold_4898
Species: Pirellula staleyi (50%)
6 7277 bp 63.74 1.00 73.96
anamox1_curated_scaffold_9987
Order: Planctomycetales (50%)
6 4393 bp 63.92 1.00 78.06
anamox1_curated_scaffold_5456
Class: Planctomycetia (66.67%)
6 7085 bp 64.98 1.00 84.98
anamox1_curated_scaffold_9522
Class: Planctomycetia (50%)
6 4457 bp 59.17 1.00 65.16
anamox1_curated_scaffold_5289
Species: Pirellula staleyi (50%)
6 7428 bp 64.49 1.00 74.76
anamox1_curated_scaffold_4638
Class: Planctomycetia (50%)
6 7694 bp 64.56 1.00 86.17
anamox1_curated_scaffold_2695
Species: Pirellula staleyi (83.33%)
6 12161 bp 66.38 1.00 93.92
anamox1_curated_scaffold_11680
Order: Planctomycetales (50%)
6 4231 bp 60.62 1.00 62.25
anamox1_curated_scaffold_5215
Order: Planctomycetales (50%)
6 7000 bp 61.83 1.00 71.36
anamox1_curated_scaffold_8647
Class: Planctomycetia (50%)
6 7370 bp 62.12 1.00 65.09
anamox1_curated_scaffold_6831
Class: Planctomycetia (50%)
6 5655 bp 64.37 1.00 82.44
anamox1_curated_scaffold_6677
Class: Planctomycetia (66.67%)
6 5719 bp 65.13 1.00 83.72
anamox1_curated_scaffold_4517
Order: Planctomycetales (50%)
6 8144 bp 61.35 1.00 71.43
anamox1_curated_scaffold_5544
Species: Gimesia maris (50%)
6 6306 bp 62.56 1.00 79.73
anamox1_curated_scaffold_2319
Species: Pirellula staleyi (66.67%)
6 13542 bp 67.81 1.00 96.01
anamox1_curated_scaffold_3896
Class: Planctomycetia (50%)
6 10525 bp 63.62 1.00 74.17
anamox1_curated_scaffold_8016
Class: Planctomycetia (66.67%)
6 5510 bp 62.76 1.00 79.11
anamox1_curated_scaffold_22606
Order: Planctomycetales (50%)
6 3718 bp 62.05 1.00 61.57
anamox1_curated_scaffold_10548 6 5335 bp 61.63 1.00 82.77
anamox1_curated_scaffold_8641 6 4582 bp 59.54 1.00 54.08
anamox1_curated_scaffold_4097
Species: Pirellula staleyi (66.67%)
6 10116 bp 65.48 1.00 89.89
anamox1_curated_scaffold_4053
Species: RBG_16_Planctomycetes_64_12_curated (50%)
6 8813 bp 64.13 1.00 82.48
anamox1_curated_scaffold_3928
Class: Planctomycetia (50%)
6 9089 bp 62.09 1.00 80.14
anamox1_curated_scaffold_5589
Species: Blastopirellula marina (50%)
6 7022 bp 64.47 1.00 87.41
anamox1_curated_scaffold_6037
Species: Pirellula staleyi (50%)
6 6301 bp 61.89 1.00 58.56
anamox1_curated_scaffold_7948
Species: Singulisphaera acidiphila (50%)
6 5080 bp 65.16 1.00 86.57
anamox1_curated_scaffold_4434
Order: Planctomycetales (50%)
6 8099 bp 64.30 1.00 80.68
anamox1_curated_scaffold_4329
Species: Pirellula staleyi (50%)
6 8168 bp 63.16 1.00 84.51
anamox1_curated_scaffold_3718
Order: Planctomycetales (50%)
6 9179 bp 63.93 1.00 76.32
anamox1_curated_scaffold_7554
Order: Planctomycetales (50%)
6 5452 bp 63.66 1.00 85.12
anamox1_curated_scaffold_5334
Class: Planctomycetia (66.67%)
6 7073 bp 64.13 1.00 86.87
anamox1_curated_scaffold_8277
Order: Planctomycetales (50%)
6 5247 bp 63.22 1.00 82.22
anamox1_curated_scaffold_4142
Order: Planctomycetales (66.67%)
6 8463 bp 64.13 1.00 80.47
anamox1_curated_scaffold_4544
Class: Planctomycetia (50%)
6 7830 bp 64.18 1.00 62.87
anamox1_curated_scaffold_8630
Order: Planctomycetales (50%)
6 6349 bp 63.70 1.00 65.07
anamox1_curated_scaffold_5351
Class: Planctomycetia (50%)
6 9139 bp 63.60 1.00 81.31
anamox1_curated_scaffold_5704
Order: Planctomycetales (83.33%)
6 12238 bp 66.63 1.00 84.03
anamox1_curated_scaffold_4189
Class: Planctomycetia (66.67%)
6 9040 bp 62.92 1.00 75.00
anamox1_curated_scaffold_5487
Domain: Bacteria (50%)
6 7417 bp 63.26 1.00 71.59
anamox1_curated_scaffold_5992
Class: Planctomycetia (66.67%)
6 6299 bp 64.31 1.00 90.68
anamox1_curated_scaffold_9271 6 4331 bp 63.54 1.00 82.64
Displaying items 151-200 of 783 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.