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anamox1_curated_scaffold_18576_3

Organism: anamox1_Proteobacteria_65_15_curated

near complete RP 42 / 55 MC: 4 BSCG 41 / 51 MC: 3 ASCG 4 / 38
Location: comp(1657..3090)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Thiocapsa marina 5811 RepID=F9UBR1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 481.0
  • Bit_score: 445
  • Evalue 5.40e-122
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EGV18379.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 481.0
  • Bit_score: 445
  • Evalue 7.60e-122
nitrogen assimilation regulatory protein NtrX similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 479.0
  • Bit_score: 436
  • Evalue 5.50e-120

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Taxonomy

Thiocapsa marina → Thiocapsa → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAGCGCAGCGCATATTCTGGTGGTGGACGACGAGAGCGACATTCGCAGTCTCCTCACGGAGATCCTCTCGGAGGAGGGGTACGAGGTCGATGCCGCGGCCAACGCGAGCGAGGCACGCGCCTCGCGCGCCAACCGCTTGCCGGATCTCGTGTTGCTCGACATCTGGATGCCGGACGTCGATGGCATnnnnnnnnnnTTGCCGGATCTCGTGTTGCTCGACATCTGGATGCCGGACGTCGATGGCATCACGCTGCTGCGGGAGTGGTCGAACCAGGGCGGCGAGAGCTGCCCGGTCGTGATGATGTCGGGGCACGGCACCGTCGAGACTGCAGTCGAGGCGACGCGCCTCGGCGCCTTCGATTTCGTCGAAAAGCCCCTCTCGCTCGCAAAGCTGCTGCGAACCGTCGAGCGCGCGCTCGACGCAGGCCGGCGCCGACGCGGCGGTGGGCGCCTCGCGGTACCGCCGTTGATGGTACCGGTGGGCAAGAGCCCGGTGATGCGCCAGTTGCGCACGGATCTCGCGCAAGTCGCCCACAGCGGGCGCGTGCTGTTCACCGGCGAGTCCGGCAGCGGCCGCGAAGCGTTTGCGCGCTATCTGCGGGAAGCGGGTGACCGCGCTTCGCGGCCGCTCGTGACCCTCGTCGCGAGCACCGTGCGCGAAACGGATGCCGAGTCGCTGCTGCTTGGCAACCAGTCCGGCAGTGACGCGGGCCAGGGGCCGAGGAAGGGCATTCTCGAACAGGCAACGGGCGGCACCCTTTTCATCAGGGATATCGACGACCTGCCCTCCGCGGCGCAACGCATCCTTCTCGGGGTGCTCGAAACCGCGAGCTTCACGCGGGTAGGTGGTACCGAGCCGGTGCCGTTCGATGCGCGTGTGTTCGCATCCGCGCGGCCGGGCATCGAGCAGCGCGCGGGCCTCGGCGAGTTTCGCAGCGACCTGCTGGCACAGCTGAACACACTCGTCTTTCGCGTGCCGCCGCTGCGCGAGTACGCCGAGGACGTACCGGAGTTGCTGCGCTACTACGTCGACCGGCTGGTCGATGCGGAGGGCCTGCCGTTTCGCAAATTCAGCGTGGCTGCGCAGAACCGCCTGCGCAACTATCCCTGGCCGGGCAACATCCGCGAACTGAAGAACCTCGTGCATCGCCTGTTGCTGAAAGGTGGCGCGGACGAGATCGGCCTCGATGAAGTGGAGCGCGAGCTTGCCGTGCAATCGCCCTCCGAGGAGCCGCTCGTCAAGCAGGATCTCCTGGCCCTGCCGCTGCGCGAGGCGCGCGAGCAGTTCGAGCGCACCTATCTGCAGCAGCAGCTGCTGCTGTGCAACGGCAAGGTCGGGCTCCTCGCCAAGCGCGTCGGCATGGAACGCACGCACCTCTATCGCAAGTTGCGCTCGCTAGGCGTCGAGTTTCGCGGTATCGGCGATGAGTAG
PROTEIN sequence
Length: 478
MSAAHILVVDDESDIRSLLTEILSEEGYEVDAAANASEARASRANRLPDLVLLDIWMPDVDGXXXXLPDLVLLDIWMPDVDGITLLREWSNQGGESCPVVMMSGHGTVETAVEATRLGAFDFVEKPLSLAKLLRTVERALDAGRRRRGGGRLAVPPLMVPVGKSPVMRQLRTDLAQVAHSGRVLFTGESGSGREAFARYLREAGDRASRPLVTLVASTVRETDAESLLLGNQSGSDAGQGPRKGILEQATGGTLFIRDIDDLPSAAQRILLGVLETASFTRVGGTEPVPFDARVFASARPGIEQRAGLGEFRSDLLAQLNTLVFRVPPLREYAEDVPELLRYYVDRLVDAEGLPFRKFSVAAQNRLRNYPWPGNIRELKNLVHRLLLKGGADEIGLDEVERELAVQSPSEEPLVKQDLLALPLREAREQFERTYLQQQLLLCNGKVGLLAKRVGMERTHLYRKLRSLGVEFRGIGDE*