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anamox1_curated_scaffold_4866

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4866_1
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(749..1591)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Ribosomal RNA small subunit methyltransferase I Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQN8_PSEUU
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
anamox1_curated_scaffold_4866_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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1688..3550
DNA (1863bp) protein (621aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000380903B
LppC family lipoprotein
LppC family lipoprotein {ECO:0000313|EMBL:ADE13661.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_4866_3

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3567..3923
DNA (357bp) protein (119aa)
UPF0102 protein Fraau_0360 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L350_FRAAD
hypothetical protein
Uncharacterized protein family UPF0102 domain protein {ECO:0000313|EMBL:EQD80954.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anamox1_curated_scaffold_4866_4

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comp(3929..4321)
DNA (393bp) protein (131aa)
Stringent starvation protein b (Fragment) Tax=mine drainage metagenome RepID=T1C9M0_9ZZZZ
Stringent starvation protein b {ECO:0000313|EMBL:EQD78907.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Stringent starvation protein B
anamox1_curated_scaffold_4866_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4334..4957)
DNA (624bp) protein (208aa)
stringent starvation protein A Tax=Thiothrix flexilis RepID=UPI000368933F
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EIJ33671.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
sspA; stringent starvation protein A
anamox1_curated_scaffold_4866_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5045..5827)
DNA (783bp) protein (261aa)
Cytochrome c1 Tax=sulfur-oxidizing symbionts RepID=G2FDU5_9GAMM
Ubiquinol cytochrome C oxidoreductase {ECO:0000313|EMBL:AHY59576.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
cytochrome C1
anamox1_curated_scaffold_4866_7
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5817..7079)
DNA (1263bp) protein (421aa)
Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC:1.10.2.2)
Cytochrome b Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YKA8_METFJ
Cytochrome b {ECO:0000256|RuleBase:RU003385}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans.;"
anamox1_curated_scaffold_4866_8
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7079..7471)
DNA (393bp) protein (131aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-1.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit Tax=Thalassolituus oleivorans MIL-1 RepID=M5DN30_9GAMM
Ubiquinol-cytochrome c reductase, iron-sulfur subunit
Displaying 8 items

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