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anamox1_curated_scaffold_3353_1

Organism: anamox1_Proteobacteria_67_8_curated

near complete RP 50 / 55 MC: 1 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(3..716)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 237.0
  • Bit_score: 257
  • Evalue 1.50e-65
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Tax=Thiorhodovibrio sp. 970 RepID=H8YY85_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 237.0
  • Bit_score: 257
  • Evalue 1.00e-65
TrmA family RNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 237.0
  • Bit_score: 241
  • Evalue 1.30e-61

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Taxonomy

Thiorhodovibrio sp. 970 → Thiorhodovibrio → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
TTGAGGCGCCCGCGGGAGGCGGAGCCGATCGAAACCGGAGTCGTCGCTGCGCTCACTCACGAGGGTGAGGGCGTCGTGAGGGCGGGAAAGACCGTATTCGTCGTGGGCGCCCTGCCTGGCGAGACGGTGCGCTTCCGGCGCATGCGGCGTCGTCGCCAGCATGACGAAGCGGAACTCGTCGAGGTCGTGCAGGCCGCACCCGGGCGCGTCACACCGCGCTGCGCTCACTTCGGCATCTGCGGTGGCTGTGCGCTGCAGCATCTCGAATCCAGGGCACAGCTTGCCGCCAAGGAGCGTGAGCTCGCGGAGAGTCTGGAGCGGGTGGGCCAGGTGCAGCCGCCCGAGTGGCTCGCGCCGCTCGAGGGCCCGGTCTGGCACTACCGCCGGCGGGCCCGTCTCGGGGCAAAATTCGTCTCGAAGAAGGAGCGGGTAGTCGTCGGCTTCCGTGAGCGGCACGCGCCCTACGTTGCCGACCTGCGAAGCTGCGTGGTGCTGGCTGCGCCGGCCGACCGTCTGATCGAACCGCTCGCGCAGCTGCTCTCCGGGCTCACCATCCGTGAGCGCGTGCCGCAGATCGAAGTGGCCGTTGGCGATGCGGCAACTGTGCTCGTCCTGCGGGTGCTGCAGGAGCCGACGCCGGCTGATCGCGAGCGACTGGCGGCCTTCGAGGCCGCGGAGAAGGTGCGCATCTACCTGCAACCGGGGGGCACTGCA
PROTEIN sequence
Length: 238
LRRPREAEPIETGVVAALTHEGEGVVRAGKTVFVVGALPGETVRFRRMRRRRQHDEAELVEVVQAAPGRVTPRCAHFGICGGCALQHLESRAQLAAKERELAESLERVGQVQPPEWLAPLEGPVWHYRRRARLGAKFVSKKERVVVGFRERHAPYVADLRSCVVLAAPADRLIEPLAQLLSGLTIRERVPQIEVAVGDAATVLVLRVLQEPTPADRERLAAFEAAEKVRIYLQPGGTA