ggKbase home page

anamox1_curated_scaffold_367_61

Organism: anamox1_Sphingobacteriales_42_27_curated

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(63579..64454)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 291.0
  • Bit_score: 490
  • Evalue 1.20e-135
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:GAO41537.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 291.0
  • Bit_score: 505
  • Evalue 5.00e-140
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 291.0
  • Bit_score: 490
  • Evalue 3.30e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGCATGAGGCAATTGAAGATCACGAAATCGATCACGAACCGTGAATCTCAAAGTTTGGAGAAATATCTCCAGGAAATCGGCAAGGTCGAATTAATTCCCCCGGAAGAAGAGGTTAGATTAGCAAGCCTGATCAAACAGGGCGATCAAAGAGCTTTGGATCGTTTGACCAAAGCCAATCTTCGTTTTGTTGTATCAGTGGCCAAGCAATATCAAAACCAGGGGCTGTCCCTTCCCGACCTGATCAATGAAGGAAACCTGGGGCTGATAAAAGCGGCACAGCGTTTCGATGAAACACGGGGTTTTAAATTTATTTCTTACGCCGTATGGTGGATCCGTCAAAGTATTTTACAAGCCCTGGCGGAACAGTCACGCATCGTAAGGCTCCCATTAAATAAAGTGGGCCTGACCAATCGCATTCAGAAAGCTTATTCCCAGCTGGAACAGGAATTTGAAAGGGAGCCTTCTGCTGAAGAACTGGCAGATGTGCTGCAGATTGACCTGGAAGAAGTATCTGCCACCCTGGGGATCGCCGCCCGTCATGTCAGCGTGGACACGCCTCTTGCCGAAGGCGAGGAAAACACATTGCTCGATGTACTCGAAAACCCGAATGCCGATAAAACAGATGCTGAACTGGATCATAAAGAATCTTTGAAAACAGAGATTGACAGGTCTTTGAAAGCATTGACAGAAAGGCAAAAAGAAGTGATCTGTTACTTCTTTGGTATCGGAGTGGATCATCCGATGAGCCTGGAAGATATCGGTGCAAAATTTAACCTAACCAGGGAAAGAGTACGGCAGATAAAAGATAAAGCGATTACCAAATTAAGGACCGCCTCAAAAGGCCAGCTTTTAAGAACTTACTTAGGTATGTAA
PROTEIN sequence
Length: 292
MSMRQLKITKSITNRESQSLEKYLQEIGKVELIPPEEEVRLASLIKQGDQRALDRLTKANLRFVVSVAKQYQNQGLSLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKVGLTNRIQKAYSQLEQEFEREPSAEELADVLQIDLEEVSATLGIAARHVSVDTPLAEGEENTLLDVLENPNADKTDAELDHKESLKTEIDRSLKALTERQKEVICYFFGIGVDHPMSLEDIGAKFNLTRERVRQIKDKAITKLRTASKGQLLRTYLGM*