ggKbase home page

anamox1_curated_scaffold_2804_11

Organism: anamox1_Sphingobacteriales_42_27_curated

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(8970..9554)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Niabella soli DSM 19437 RepID=H1NNB2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 186.0
  • Bit_score: 297
  • Evalue 5.70e-78
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 178.0
  • Bit_score: 289
  • Evalue 4.40e-76
RNA polymerase {ECO:0000313|EMBL:AHF15320.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 178.0
  • Bit_score: 289
  • Evalue 2.20e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
TTGAAATTGACACCTGAACGCAACCAAAATATCCCCGAAAGCGACTTAATCAATGGATGCATGGAAGAAAACAGGCTCATGCAGGAGGAGTTGTACCGCCGTTTATCTCCAAAAATGTATGCCGTTTGCCTCCGTTATGCCTCCGATGCCGAAGAAGCACAGGATATTTTGCAGGAAGGTTTTATCAAAGTGTTTAAAAAGCTGTACAGCTTCCGTGGCGATGGTTCTTTTGAAGGTTGGGTCCGCCGGATCTTTGTCAATACATCCATCGAGCACTTCCGGCGCAGGAGGTATATGCAACCGGTCACCGATAAGGAAGAGAACAGTATTGAAGGTAAATATGTATCGGCGCTGGATGGACTGGCCGAAAAAGATATATTGGCGCTGATACAGCAACTGTCTCCGGGATACAGAACCGTATTCAACCTGTACGTGATCGAAGGATATTCACATAAAGAGATAGGTGATATGCTCGGGATCAGTGAAGGCACCAGTAAATCACAACTTTCAAGAGCCAAAGTGATCTTGCAAGGCATGGTAAAAGAATTCATAGATCAGCAGGAAGTCAGAAAAATAAAGCCATGA
PROTEIN sequence
Length: 195
LKLTPERNQNIPESDLINGCMEENRLMQEELYRRLSPKMYAVCLRYASDAEEAQDILQEGFIKVFKKLYSFRGDGSFEGWVRRIFVNTSIEHFRRRRYMQPVTDKEENSIEGKYVSALDGLAEKDILALIQQLSPGYRTVFNLYVIEGYSHKEIGDMLGISEGTSKSQLSRAKVILQGMVKEFIDQQEVRKIKP*