ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

LAC_NA06_curatedSub20_scaffold_258_16

Organism: LAC_NA06_sub_Chloroflexi_61_22_curated

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: comp(13296..14492)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000382EFE5 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 398.0
  • Bit_score: 633
  • Evalue 1.20e-178
Aminomethyltransferase {ECO:0000313|EMBL:KGQ20077.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 398.0
  • Bit_score: 602
  • Evalue 2.40e-169
glycine cleavage T protein (aminomethyl transferase) similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 391.0
  • Bit_score: 417
  • Evalue 2.90e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGTTCAATCTAAAGACCACCCCCTTCCATGAGCGGACGTCCGCTTTGTGCCAGCCGCAGAACTGGCGCAAATGGGCGGGCTACTTCGCCGCCGGTTCGTACGAACACACGCTCGACCGCGAGTATTGGGCCATCCGCAACGCGGCCGCGCTGATAGACGTCACGCCGCTGATCAAGTACCTCGTCAAAGGCCGGGACGCGGCCGCGCTGCTGCATCGCGTCACCACGCGCGACATCCACAAGATGAAAGTGGGACAGGTGGCCTACACGGGCTGGTGCGACGAGGACGGGAAGATGATAGACGACGGGACCGTCTCCCGCCTCGACGATTCGACCTTCCGCCTGACCGCGGCCGAACCGAACCTCCGCTGGCTGACGCTGAACGCGGTCGGCATGGACGTGGAGATCGTCGAGATCACCGACGAGGTCGCGGCGCTCAGTCTGCAGGGACCCCATTCGAGGTCCGTGCTGAAGCGGGTCTGCGAGTCGGACGTGGACGGGTTGAAATACTTCCGTCTGATGGAAAACAAGATTGGCGGGGCCGACGTCACGATCTCGCGGACGGGTTACACGGGCGATCTCGGCTACGAGGTCTGGATGGCGAACAAGGACGCGCTCCCCGTCTGGGACGCGTTGATGGACGCGGGCGCGGACTACGGCATCACGCCCGTCGGGATTTTGGCGATGGACATGGCGCGCGTCGAAGCGGGGCTGTTCATGCTCGACGTGGATTACACCTCCGCCTCGCACGCGTGGATCGAGCGGCAGAAGTCCTCGCCGTTCGAGTTGGGCCTCGATTGGACCGTCGCGCTCGACAAGCCCGGCTACTTCGTCGGACGCCGCGCGCTGGAGAAAGAGAAGCGCGAAGGCTCCGAGTGGAAGATGGTCGGCCTGGAAGTGGACTGGGAGGGGATGGAGAAATTATTCAAAAAAATGGGACTGCCTCCGCAGATCCCCGGCATGGCGATTCGGGCGAGCCTGCCCGTGATGGCGGGAGGCAAACAAGTGGGATACGCGTCCACTTCGAGTTGGTCGCCGCTGTTGAAAAAATACATCGCGCTGGCGCACTTGCAGAGGCCGCATTACGAGATCGGGACGAACGTGACGATGGAGGTCACGGTGGAACATCAACGCCGGCACGCGCCCGCCCGCGTGGTGAAACTTCCCTTTTACGAACCCGAATGGAAAAAGAAATAA
PROTEIN sequence
Length: 399
MFNLKTTPFHERTSALCQPQNWRKWAGYFAAGSYEHTLDREYWAIRNAAALIDVTPLIKYLVKGRDAAALLHRVTTRDIHKMKVGQVAYTGWCDEDGKMIDDGTVSRLDDSTFRLTAAEPNLRWLTLNAVGMDVEIVEITDEVAALSLQGPHSRSVLKRVCESDVDGLKYFRLMENKIGGADVTISRTGYTGDLGYEVWMANKDALPVWDALMDAGADYGITPVGILAMDMARVEAGLFMLDVDYTSASHAWIERQKSSPFELGLDWTVALDKPGYFVGRRALEKEKREGSEWKMVGLEVDWEGMEKLFKKMGLPPQIPGMAIRASLPVMAGGKQVGYASTSSWSPLLKKYIALAHLQRPHYEIGTNVTMEVTVEHQRRHAPARVVKLPFYEPEWKKK*