ggKbase home page

LC_0.1_scaffold_1116_13

Organism: LC_01_Methanoperedens_46_27

near complete RP 30 / 55 MC: 2 BSCG 28 / 51 MC: 2 ASCG 36 / 38 MC: 1
Location: 13025..16534

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D1A890 related cluster n=1 Tax=unknown RepID=UPI0003D1A890 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 1174.0
  • Bit_score: 1341
  • Evalue 0.0
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 1169.0
  • Bit_score: 1864
  • Evalue 0.0
chromosome segregation protein SMC similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 1175.0
  • Bit_score: 1337
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3510
GTGCATATAAAGGAGATAGAACTTCAAAATTTCAAATCTTTCGGAAAAAAAGTAAAAATCCCATTCTTTGACGATTTCACGACCATTTCCGGTCCAAACGGAAGCGGAAAATCCAATATAATAGACGGTATACTCTTCGCTCTCGGTCTTTCCAACTCCAGGATCATGAGGGCTGAGAAACTGACAGACCTCATATTCAACGCAGACGGCGGGAGGAAGAATTTCGCGCAGGTCACTATTCGCTTCGATAACAGAGACCGGGAGATGCCTGTGGATGCGGACGAGGTCGCGGTCACGCGCAAGGTAAGGCAGACCGAGTCGGGGTATTACAGCTACTATTATTTTAACGATACGCCTGTCAGCCTCTCAGATATCCACAACAACCTGTCCAAGGCAAAGATAACGCCCGAGGGTTATAACGTGGTAATGCAGGGCGACGTCACCCACATCATCGAGATGACGCCAACTGAGAGGCGCAAGATAATAGACGAGATCGCAGGCGTGGCTGAGTTCGATGACAAGAAAGAGCAGGCTCTGAACGAGCTTGAGATTGTGCGCGAGCGGATAGAAAGGGTCGATATAATCCTGGCTGAGGTAGGGGAGCAGCTTATCAGGCTCCAGCAGGAGCGCGACCAGGCTCTCAAGTACCAGTCGCTGCGTGACGAGAAGCGGAAATACGAAGGGTACGTCCTGCTTGCAAGGCTCAAGGACGCAAGGAACGAGCTTAACAGGCTTGAGGGCGAACTCAGGGAGAGAGAGGCTAAAAAGGAAGAGCTGAAGAGGCAGGCAGAGGAGCGCAGGCAGGAACTGAAGAGGACAGAGGATGCGCTTTCGGAATTGAATTCACTCATCATCCAGAAAGGCGAAGGTGAGCAGATAGCACTCCGGAGAGAGATCGAATCCATCAAGGGCGAGATATCCCGCTGCAACAGTACAATCGAGCTTTCAGAGAACGAGATCAACGACATTGAATCCCAGAGGAGAAAAGCCTTCCTCGATATCGACGGCATGCAGGGCAAAGTGGCAGAGCTTGTCGCTAAACTGAACGAGGAGAACCTGAGGAAAGAGACGGTCTCGGCTGAGCTTGACGATAAAAGGACCAAGCTCCTTGTGGTGAGAAGCAAAATAGCCGAAGTGGATGCGCAGTTCACAGGGACGAGGGATAAGCTGGCTGAATCAAAGCAGCAGCTTGAGGCGCATAAGAACGGGAAGAACGAGCTTATGCGGGAAGAAGACCGCCTGCTTGATGCGATACGGCGGAAATCCTCTGAGGCAAGGGACATCGAGCTTGAGATACAGGACTCGGTTTCCAAGATCGGCTCTGCGGATCTCGATACAAGCAGTGTCAAAAACCGTGTAGAGGAGATCGCCGCGAAGAGGCAGGAGCTTGTTAAGGATTCGGTCGATCTTGAGAAGAACAGGGTGCAGATAAAGATGGTGATAGCAGACCTTGACAACTCCCTGCGGCTCTTCCAGCAGGAGTACGCAAAATCCGAGGCGCGGATAAAGGCTGCAGCAGAGATCAATTACAGCGAGCCGGTCGAGGCTGTACTTCGCGCAAAGAAGAGCAGGGAATTACCCGGAGTATACGGCACGATAGCAGAACTCGGGAAGGTCGATAAAAAATATTCGGTCGCCCTTGAGATAGCGGCTGGCGCAAGGATGCAGTCCGTGGTCGTGGATACGGATGAGGACGCTGCAAGAGCTATCGAATACCTGAAGCAACGGCGCCTGGGAAGAGTGACTTTCCTGCCTCTTAACAGGATGGAGGCTATGGCTTCTCTCTCCAAGAAAGAGAAAGATGGCGTTATCGATTATGCCATCAATCTCGTTGATTACGATAAAAAGTTCAGTTCAGTTTTCTGGTACGTCTTCAGGGACACGCTCGTACTTGACAGCCTGAACACTGCGAGGAAGCTCATGGGCGGGAAGCGCCTCGTGACCCTTGAGGGTGAGCTGATAGAGAAGGCGGGCGCAATGACCGGGGGCACGATAAGATCAAAGCTCTCGTTCGCAAGCGGGGAAGAGGAGAACATCAAGAAAATAGCCGAGCAGATATCGGAGTACGAGGGAAGGCGAAAATCTGCAGTTAATAAGTTAGAGAAGACAGAGGAGCACCTGGCAGGGCTTAAGGATGAGTCTTCCAACTTCGATAAGGAGATATCAAAGCTTGAGATGCAGATGGAAGAGATAAAGAGCCGGGGCACGCGGCTTGCTGAACTTATCGAGTCAAGGAAAAAACAGCTTGCTGAAATAGAGAATGAGCGCATCGAGATAAAGAAGAAGATGGACTGCATTGAGGATGATAAACGCTCAAGGGATGCTCTGATAAATACTCTGCTTGAGGATATCGGGAAGCTTGAGGAATTGTTAAAAGGCTCCGAAGTTCCTGAACTGAGCAACAAAGCCGGAAAGATTGAGGAGGAGATCGACAGACTTGAAGGAAGGATGCGGGACATTGAGGCAGGTATCAATGCAATTGAGCTTGACAGGAAATATGCGCAGGAAAGAATAGATGAGACAAAGGCGCGGCTCTCGGAGCTTGATAAAAAGAAAGAAGGGCACCGTGAAAAGATCAATACCCTGCGCGGGCAGATAAAGAAGCTTGAATCCGACCTGAAGGCTAAGACCATACGGGAGATGGAGCTTGGGGGAGAGCTGCTTGAGCTTCAGAATAAGAGAATGCGGATACAGAGCGAGGAGAATTCCCTGAAAGAGAGGCTTCTGGATGTCCAGAGAGTGCTGGGCGACCTTGAGAGGAACCTGCTTGCGCTCCAGTCCACGAAGGACGCGCTGACAGAGCAGATAATCGCACTTGATAATGAGATAGCAGAGCGCGGGCTGAACCGGGACGAAGAGGTACCTTCTTCCGAATCCATAGCCTCAAGGATAGCTGCGCTCACGCGGGCGATGGAGAAACTTGAGCCAGTCAACATGAGGGCAATAGATGAGTATAACGGCGTTGAGAACAGGCAGAAAGACTTAAAATCCAGGCGCGATACCCTGTTCCGCGAACGCGAGGAGATAATACTTCGCATTAAGAAGTGCGAGGAGATGAAGAAAGAGACGTTCATGAACACCTTTGACGGCGTGAACGAACAGTTCAAACAGGTGTTCGCAGAATTATCAGATGGAACGGGCGGACTTTTCCTTGAGAATCCCGACGACCCGTTCTCAGGGGGGATGACGATAAAGGCACAGCCGTCCGAGAAGACCCTTCAGCGCCTTGAGGCTATGTCGGGAGGCGAGAAAAGCCTGACCGCGCTGTCGCTGCTCTTCGCAATCCAGCAGTACAGACCTGCACCTTTCTATGCCTTTGATGAGATCGACATGTTCCTTGACGGCGTGAACGCAGAGAAGGTTGCAAGGCGCATCCAGAAAGCCTCCGCGAACGCCCAGTTCATCGTGGTCTCGCTGAGGAAGCCCATGATAGAGGCTGCAAAGAGAACTGTTGGCGTGGCGATGCAGGAGAACAATATATCGAGCATCACGGGTATCCAGTTGAACTGA
PROTEIN sequence
Length: 1170
VHIKEIELQNFKSFGKKVKIPFFDDFTTISGPNGSGKSNIIDGILFALGLSNSRIMRAEKLTDLIFNADGGRKNFAQVTIRFDNRDREMPVDADEVAVTRKVRQTESGYYSYYYFNDTPVSLSDIHNNLSKAKITPEGYNVVMQGDVTHIIEMTPTERRKIIDEIAGVAEFDDKKEQALNELEIVRERIERVDIILAEVGEQLIRLQQERDQALKYQSLRDEKRKYEGYVLLARLKDARNELNRLEGELREREAKKEELKRQAEERRQELKRTEDALSELNSLIIQKGEGEQIALRREIESIKGEISRCNSTIELSENEINDIESQRRKAFLDIDGMQGKVAELVAKLNEENLRKETVSAELDDKRTKLLVVRSKIAEVDAQFTGTRDKLAESKQQLEAHKNGKNELMREEDRLLDAIRRKSSEARDIELEIQDSVSKIGSADLDTSSVKNRVEEIAAKRQELVKDSVDLEKNRVQIKMVIADLDNSLRLFQQEYAKSEARIKAAAEINYSEPVEAVLRAKKSRELPGVYGTIAELGKVDKKYSVALEIAAGARMQSVVVDTDEDAARAIEYLKQRRLGRVTFLPLNRMEAMASLSKKEKDGVIDYAINLVDYDKKFSSVFWYVFRDTLVLDSLNTARKLMGGKRLVTLEGELIEKAGAMTGGTIRSKLSFASGEEENIKKIAEQISEYEGRRKSAVNKLEKTEEHLAGLKDESSNFDKEISKLEMQMEEIKSRGTRLAELIESRKKQLAEIENERIEIKKKMDCIEDDKRSRDALINTLLEDIGKLEELLKGSEVPELSNKAGKIEEEIDRLEGRMRDIEAGINAIELDRKYAQERIDETKARLSELDKKKEGHREKINTLRGQIKKLESDLKAKTIREMELGGELLELQNKRMRIQSEENSLKERLLDVQRVLGDLERNLLALQSTKDALTEQIIALDNEIAERGLNRDEEVPSSESIASRIAALTRAMEKLEPVNMRAIDEYNGVENRQKDLKSRRDTLFREREEIILRIKKCEEMKKETFMNTFDGVNEQFKQVFAELSDGTGGLFLENPDDPFSGGMTIKAQPSEKTLQRLEAMSGGEKSLTALSLLFAIQQYRPAPFYAFDEIDMFLDGVNAEKVARRIQKASANAQFIVVSLRKPMIEAAKRTVGVAMQENNISSITGIQLN*