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LC_0.1_scaffold_183_25

Organism: LC_01_Methanoperedens_46_27

near complete RP 30 / 55 MC: 2 BSCG 28 / 51 MC: 2 ASCG 36 / 38 MC: 1
Location: 19769..20575

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W4_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 217.0
  • Bit_score: 298
  • Evalue 4.60e-78
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 267.0
  • Bit_score: 431
  • Evalue 8.40e-118
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 217.0
  • Bit_score: 298
  • Evalue 1.30e-78

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 807
ATGGAAATGGATAAAAAATTGGTTATTCCGGGTGATTTTCTATCTGATGATGCAGAACTGGCTGATGAGGGCACGTACGTTGAGGACGGGAGGGTGTACTCCTCGGTCTTCGGTGTGGCATCTCTGAAAGACCGCATCAGGGTAGTCCCGCTCTCCGGGAAATATATCCCCAGAGCCGGTGACGTGATAATTGGCGTTATAAAAGAGATTGCTTTTTCTAACTGGATCGTGGATATCAGGTCTCCTTACGAGGGACTGCTGCACATTTCAGAATTTCCCCGGCGGATTGAGAGCGCGGATATGTCTAGGTACCTCAATATCGGCGATTCGATAATGGCACTTGTAAGCGATGTTGACGCGAATATGAAGGTCGAACTTACACTGAACGACCAGAGGCTAAGACCGATAAAGGAGGGGCGTATCATTGAAGTGACGCCTTCCAAGGTCCCAAGGTTGATCGGCAGGGGCGGTTCGATGATCGCAATGCTGAAGAGCGAGACCGGCTGCAATATCTTTATCGGTCAGAACGGCAGGGTCTGGATATCAGGCAAGGATAAAGGCATGGACCTGGCAGCCAGGGCGATACTCAAAATAGAGAAAGAGACGCATATTTCGGGTCTTACCGACAGGATAACAAAGTTCCTGAAGGAAGAGAAGGGTGAGAAACCTAAAGAAAAAGAACCGGAGCAAGAAGAGGTTAAGAAAACCGAAACCCCTGAGGAAGAACCTCTGCCAGCGCAGGAGGAAAAAATTGAAGAGGATAAATCCGGAGGGATTCTTGATGAACTCCTCGGGAATGACAAATAA
PROTEIN sequence
Length: 269
MEMDKKLVIPGDFLSDDAELADEGTYVEDGRVYSSVFGVASLKDRIRVVPLSGKYIPRAGDVIIGVIKEIAFSNWIVDIRSPYEGLLHISEFPRRIESADMSRYLNIGDSIMALVSDVDANMKVELTLNDQRLRPIKEGRIIEVTPSKVPRLIGRGGSMIAMLKSETGCNIFIGQNGRVWISGKDKGMDLAARAILKIEKETHISGLTDRITKFLKEEKGEKPKEKEPEQEEVKKTETPEEEPLPAQEEKIEEDKSGGILDELLGNDK*