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Montesol18-Sp2_coassembly_scaffold_1006044

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_1006044_1
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..571)
-----------------
DNA (570bp)
protein (190aa)
Two-component response regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUC1_AZOS1
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAI72000.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_1006044_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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869..2218
-----------------
DNA (1350bp)
protein (450aa)
Signal recognition particle protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIB5_AZOBR
RNA-binding protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_1006044_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2269..2643
-----------------
DNA (375bp)
protein (125aa)
30S ribosomal protein S16 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRX5_AZOS1
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_1006044_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2696..3253
-----------------
DNA (558bp)
protein (186aa)
Ribosome maturation factor RimM n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z327_AZOL4
rimM; 16S rRNA processing protein
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Montesol18-Sp2_coassembly_scaffold_1006044_5
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3250..3957
-----------------
DNA (708bp)
protein (236aa)
trmD; tRNA (Guanine-N(1)-)-methyltransferase (EC:2.1.1.-)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AD40_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_1006044_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3980..4441
-----------------
DNA (462bp)
protein (154aa)
50S ribosomal protein L19 n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1J4_9PROT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
rplS; 50S ribosomal protein L19
Montesol18-Sp2_coassembly_scaffold_1006044_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4500..5909
-----------------
DNA (1410bp)
protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIC2_AZOBR
leuC; 3-isopropylmalate dehydratase, large subunit
Montesol18-Sp2_coassembly_scaffold_1006044_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5906..6379
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000366937B
Uncharacterized protein {ECO:0000313|EMBL:EIM30607.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
glutathione-dependent formaldehyde-activating protein
Montesol18-Sp2_coassembly_scaffold_1006044_9
Bacillus infantis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6411..7079
-----------------
DNA (669bp)
protein (223aa)
YxaI n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B5F2_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX03637.1}; TaxID=1367477 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus infantis NRRL B-14911.;"
Montesol18-Sp2_coassembly_scaffold_1006044_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7112..7723
-----------------
DNA (612bp)
protein (204aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3V1_AZOL4
leuD1; 3-isopropylmalate dehydratase small subunit
Montesol18-Sp2_coassembly_scaffold_1006044_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7776..8888
-----------------
DNA (1113bp)
protein (371aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
3-isopropylmalate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JNI7_9PROT
leuB; 3-isopropylmalate dehydrogenase
Montesol18-Sp2_coassembly_scaffold_1006044_12
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8976..9194)
-----------------
DNA (219bp)
protein (73aa)
Glr2697 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NH40_GLOVI
glutathione S-transferase
Tax=RBG_16_Gamma2_60_9_curated
Displaying 12 items

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