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Montesol18-Sp2_coassembly_scaffold_1258554_12

Organism: Montesol18_Sp2_coassembly_Alphaproteobacteria_66_15

near complete RP 39 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 11 / 38
Location: 10929..11501

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 {ECO:0000313|EMBL:KJB94807.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 171.0
  • Bit_score: 183
  • Evalue 2.80e-43
Putative RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 177.0
  • Bit_score: 175
  • Evalue 1.20e-41
RNA polymerase, sigma-24 subunit, ECF subfamily id=2448315 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 172.0
  • Bit_score: 172
  • Evalue 3.50e-40

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCCGGCCGTTCTAGACGCCCAGGTCCGCGACCAGATGATCGCGCTCCTGCCGCGGCTGCGACGGTTTGCTCGCGGCCTTGCCGGCACGGCTGACCAGGCCGATGACTTGGTGCAGGCCGCGTGCGAGCGGGCCATCACCCGCATCGGCCAATGGACGCCCGGAACGCGGCTCGATAGCTGGATGTTCCGGATTATCCAGACCATCTGGCTGGATGAGCGACGGGCAGTCAAGGTGCGCGGCGGGGATAATCGGCTCGACCCGGCGGAAGCCACCGAGCCGGAATTGACGGTCGATGGGGTGCGACGAATGGAAGCGCATCTGACCTTCGACGCCGTACGGCGGGCGATGGGCGGATTGCCGGAAGATCAGAGGGTGGTGTTGATGTTGGTGTGCGTGGAAGGGCTGACCTACAAGGAAGCGGCGGAAACGCTCGCCGTCCCCATTGGCACGGTGATGAGCCGCCTCGCCCGCGCGCGCCTGGCGCTCGCCCACAAACTGGGCGAAAGCGCGACCGGCGACGCGGTAGGGGATCGGGTGGTGCGGCTCGGTTCGCTGGCGGCGGATAATTAG
PROTEIN sequence
Length: 191
MPAVLDAQVRDQMIALLPRLRRFARGLAGTADQADDLVQAACERAITRIGQWTPGTRLDSWMFRIIQTIWLDERRAVKVRGGDNRLDPAEATEPELTVDGVRRMEAHLTFDAVRRAMGGLPEDQRVVLMLVCVEGLTYKEAAETLAVPIGTVMSRLARARLALAHKLGESATGDAVGDRVVRLGSLAADN*