ggKbase home page

Montesol18-Sp2_coassembly_scaffold_41217_1

Organism: Montesol18_Sp2_coassembly_Nitrospinae_41_13

partial RP 35 / 55 MC: 3 BSCG 39 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(23..916)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Schlesneria paludicola RepID=UPI000299EA52 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 293.0
  • Bit_score: 353
  • Evalue 1.80e-94
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 293.0
  • Bit_score: 337
  • Evalue 2.20e-90
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 294.0
  • Bit_score: 494
  • Evalue 8.90e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Deltaproteobacteria_42_39 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGATAAATCCATTTACAGAAAGAAATGACACGGATTCTACTGATATAGCACTGGTAGAATCTGCCCAGAAGGGAGATAGAGAAGCCCTTGAGAAACTAATCCTGAGGCATCAGGCGTGGATTTACAATATCGCCATGCGTATGGTCTTGAATCCGCAGATTGCCGAAGATGTTACGCAGGAAGTTCTGATAAAGGTGATTACCAAACTCTCTACCTTTCAGGGCAGAAGCAGCTTCCGCACATGGCTCTACCGCATTGTTGTAAATCATGTGATCAACATGAAAAAGCAGTGTCTTGAACAGGTCATCACGGATTTCAAATATTACGGTAATGAATTGGACAAAACGCCGGATATGGATTTGCCTGACAGGAATTCCCTTCCTGTTGATATGCAGCTTATTGTGGAAGAAGCAAAGATCGGCTGCATGACAGGGATGCTGCTCTGTCTTGACAGAGAGCAGCGGTTAATCTATATCCTCGGAGAGATGTTTGAGGTAAGCGATGCCGTTGGCAGTGAGATTATGGAGATAAGCAGAGATAACTTCCGGCAAAAACTTTCAAGGGCGCGCAAGGATATGTATAGTTTTATGAACGAAAAATGCGGTTTGATAAATCATAACAACCCGTGCCGCTGTGCAAGAAAAACCTCGGCATGGATTCAAGCAGGGTATGTTGACCCTAATAATCTCAAGTTTAATGCAAATTATGTAAAAAGGATCAAGGATGTGTCTCAAAATAAATCAAAAGAGATATGCGAGCTCATAGATGAACAATACGCCCAACTTTTCAGAGAGCATCCCTTTCAAGACCCTCCTGATTTTGTGAAGTCGCTGGAGGGAATACTTCACACTGAACAATTTCAGCAGATTCTTAATCTTGCTCCGCACCCCTGA
PROTEIN sequence
Length: 298
MINPFTERNDTDSTDIALVESAQKGDREALEKLILRHQAWIYNIAMRMVLNPQIAEDVTQEVLIKVITKLSTFQGRSSFRTWLYRIVVNHVINMKKQCLEQVITDFKYYGNELDKTPDMDLPDRNSLPVDMQLIVEEAKIGCMTGMLLCLDREQRLIYILGEMFEVSDAVGSEIMEISRDNFRQKLSRARKDMYSFMNEKCGLINHNNPCRCARKTSAWIQAGYVDPNNLKFNANYVKRIKDVSQNKSKEICELIDEQYAQLFREHPFQDPPDFVKSLEGILHTEQFQQILNLAPHP*