ggKbase home page

RifSed_csp1_16ft_2_scaffold_50004_6

Organism: RifSed_csp1_16ft_2_Methanoperedens_43_9

partial RP 23 / 55 MC: 5 BSCG 18 / 51 MC: 1 ASCG 20 / 38
Location: 3072..3275

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Methanosarcina RepID=Q8TUK8_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 66.0
  • Bit_score: 93
  • Evalue 7.50e-17
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:KCZ72643.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 2.10e-25
translation initiation factor IF-2 subunit beta similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 66.0
  • Bit_score: 94
  • Evalue 9.50e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 204
TTGTTTACAGAAAGAGATGAAAATGCTCCTGTCTCAGCGGGTGCTGTCCATGATGTCACTATCGAGGGCATTGCCAGAGAAGGAGATGGAATAGCACGTGTACAGGGTTTTGTGATTTTCGTGCCAGGCACGAAGGTCGGAGACCATGTAAAGATAAAAATAGAGAGAGTAATGCGAAAATTCGCAATTGCAGCCCTCGAGACT
PROTEIN sequence
Length: 68
LFTERDENAPVSAGAVHDVTIEGIAREGDGIARVQGFVIFVPGTKVGDHVKIKIERVMRKFAIAALET