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Mp_Bioreactor_1_Methanoperedens_42_1

Mp_Bioreactor_1_Euryarchaeota_42_4357

In projects: Mp_Bioreactor_1 | diaphorachaeota | plasmids_of_methanoperedens | archaea_ggkbase

Consensus taxonomy: Euryarchaeota → Archaea

Metagenomic Context

Parent: Mp_Bioreactor_1_UNK

Properties

Avg. coverage: 4356.63 Longest contig: 232.86 Kbp Bin length: 3.93 Mbp GC content: 42.22 %

Contigs count: 381 Features count: 4345 rRNAs count: 0 tRNAs count: 41

Genome completeness

near complete RP 31 / 55 MC: 3 BSCG 26 / 51 ASCG 36 / 38 MC: 1

Description

(J)

Displaying items 201-250 of 381 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
Mp_Bioreactor_1_193430 Species: RBG_13_Bathyarchaeota_52_12_curated (50%)	2	1007 bp	49.75	5.06	99.50
Mp_Bioreactor_1_51146 Species: Methanosarcina barkeri (50%)	2	1760 bp	52.22	5.03	92.56
Mp_Bioreactor_1_201298 Species: Methanolobus tindarius (50%)	2	1259 bp	58.94	7.39	92.45
Mp_Bioreactor_1_203945 Species: RBG_16_Thaumarchaeota_49_8_curated (50%)	2	1697 bp	56.87	3.89	79.55
Mp_Bioreactor_1_164436 Species: Methanosarcina sp. 2.H.T.1A.6 (50%)	2	1724 bp	54.52	5.22	93.79
Mp_Bioreactor_1_129364 Species: Methanosarcina sp. 2.H.T.1A.6 (50%)	2	1278 bp	59.47	5.28	82.39
Mp_Bioreactor_1_196838 Species: BJP_S1_SUB10_Methanoculleus_61_9 (50%)	2	1344 bp	51.12	5.69	58.26
Mp_Bioreactor_1_178187 Species: Haloarcula sinaiiensis (50%)	2	1193 bp	50.21	3.90	79.21
Mp_Bioreactor_1_199430 Species: Methanosarcina horonobensis (50%)	2	1660 bp	39.58	3.98	99.40
Mp_Bioreactor_1_119522 Species: Natrialba hulunbeirensis (50%)	2	1531 bp	51.40	4.80	95.62
Mp_Bioreactor_1_170192 Species: Methanosarcina siciliae (50%)	2	1194 bp	63.15	4.77	100.25
Mp_Bioreactor_1_123865 Species: BJP_IG2103_Methanoregula_55_19 (50%)	2	1071 bp	60.78	4.34	75.91
Mp_Bioreactor_1_105746 Species: Methanomethylovorans hollandica (50%)	2	1021 bp	54.36	4.70	99.61
Mp_Bioreactor_1_106633 Species: Candidatus Methanoperedens nitroreducens (50%)	2	3277 bp	73.21	12.04	93.56
Mp_Bioreactor_1_27154 Species: Methanocaldococcus sp. JH146 (50%)	2	1024 bp	52.15	4.69	91.11
Mp_Bioreactor_1_176027 Species: uncultured marine group II/III euryarchaeote KM3_153_G11 (50%)	2	1272 bp	53.54	5.19	98.82
Mp_Bioreactor_1_47196 Species: RBG_16_Euryarchaeota_41_19_curated (50%)	2	1663 bp	65.90	6.22	96.33
Mp_Bioreactor_1_208739 Species: RBG_13_Bathyarchaeota_52_12_curated (50%)	2	1494 bp	58.90	4.32	82.33
Mp_Bioreactor_1_63504 Species: uncultured archaeon (50%)	2	1019 bp	46.91	2.65	84.49
Mp_Bioreactor_1_60255 Species: RBG_16_Euryarchaeota_41_19_curated (50%)	2	1447 bp	57.36	8.09	100.55
Mp_Bioreactor_1_161282 Species: Halorhabdus utahensis (50%)	2	3504 bp	53.03	5.99	96.66
Mp_Bioreactor_1_28011 Species: Candidatus Micrarchaeum acidiphilum (50%)	2	1003 bp	34.80	5.68	99.60
Mp_Bioreactor_1_146080 Species: Methanosarcina mazei (50%)	2	3182 bp	57.07	5.99	96.07
Mp_Bioreactor_1_27200 Species: Candidatus Nitrosoarchaeum koreensis (50%)	2	1191 bp	35.60	4.53	88.16
Mp_Bioreactor_1_11457 Species: Methanocella paludicola (50%)	2	2108 bp	57.21	6.97	91.94
Mp_Bioreactor_1_83037 Species: Methanospirillum hungatei (50%)	2	3046 bp	68.25	9.11	94.45
Mp_Bioreactor_1_158448 Species: Hyperthermus butylicus (50%)	2	1285 bp	53.85	5.25	63.27
Mp_Bioreactor_1_67377 Species: Methanocella paludicola (100%)	2	1206 bp	41.21	3588.56	77.11
Mp_Bioreactor_1_98115 Species: Methanosaeta harundinacea (50%)	2	2545 bp	49.82	4.95	94.66
Mp_Bioreactor_1_205937 Species: Methanosarcina barkeri (50%)	2	1120 bp	57.77	6.70	97.50
Mp_Bioreactor_1_89925 Species: Methanosaeta thermophila (50%)	2	1130 bp	61.68	4.51	87.35
Mp_Bioreactor_1_167508 Species: Thermofilum sp. 1807-2 (50%)	2	1037 bp	59.31	3.47	75.51
Mp_Bioreactor_1_172092 Species: Thermococcus litoralis (50%)	2	1673 bp	58.52	5.29	100.06
Mp_Bioreactor_1_181061 Species: Natronomonas moolapensis (50%)	2	1658 bp	55.37	4.98	78.71
Mp_Bioreactor_1_182006 Species: Methanolacinia petrolearia (50%)	2	2076 bp	48.03	4.91	91.04
Mp_Bioreactor_1_3439 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1155 bp	50.56	4.29	95.58
Mp_Bioreactor_1_105123 Species: Methanotorris igneus (50%)	2	2083 bp	60.30	20.09	94.48
Mp_Bioreactor_1_196964 Species: RBG_16_Euryarchaeota_41_19_curated (50%)	2	2239 bp	66.64	6.70	94.86
Mp_Bioreactor_1_98145 Species: RBG_13_Bathyarchaeota_52_12_curated (50%)	2	4736 bp	73.84	13.08	96.85
Mp_Bioreactor_1_199582 Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (50%)	2	1899 bp	42.13	5.85	97.00
Mp_Bioreactor_1_190850 Species: Methanosarcina mazei (50%)	2	1046 bp	54.49	6.02	88.34
Mp_Bioreactor_1_15333 Species: Methanohalophilus mahii (50%)	2	1278 bp	54.15	4.93	69.01
Mp_Bioreactor_1_153496 Species: CG_Pacearch_03 (50%)	2	1154 bp	71.58	4.03	83.19
Mp_Bioreactor_1_156597 Species: Methanosarcina sp. 1.H.T.1A.1 (50%)	2	1038 bp	59.63	3.18	101.45
Mp_Bioreactor_1_119693 Species: Methanosarcina barkeri (50%)	2	1646 bp	55.22	6.93	100.24
Mp_Bioreactor_1_114047 Species: Methanococcoides methylutens (50%)	2	1262 bp	54.28	6.18	87.24
Mp_Bioreactor_1_66473 Species: Methanocella arvoryzae (50%)	2	1299 bp	61.59	6.58	99.08
Mp_Bioreactor_1_3532 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1023 bp	53.08	3.81	92.96
Mp_Bioreactor_1_110289 Species: Natrialba magadii (50%)	2	2138 bp	51.40	4.91	93.87
Mp_Bioreactor_1_89110 Species: Methanosarcina horonobensis (50%)	2	1216 bp	46.30	8.63	47.12

Displaying items 201-250 of 381 in total

Mp_Bioreactor_1_Methanoperedens_42_1

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Mp_Bioreactor_1_Methanoperedens_42_1

Description

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

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