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S_p1_S3_coassembly_Woesearchaeota-II_29_154

S_p1_S3_coassembly_unknown_29_153
In projects: S_p1_S3_coassembly  |  genasci-metabolism  |  NC_groundwater_CPR_DPANN  |  DPANN  |  all_nc_groundwater_genomes

Consensus taxonomy:

Taxonomy override: Woesearchaeota

Description

S_p1_S3_coassembly_Nano_Woesearchaeota_29_154; GD17-1_Sp1_coassembly_Maxbin2_193 RK

Displaying items 51-92 of 92 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_p1_S3_coassembly_k141_755531
Species: CG_Micra_04 (50%)
2 5322 bp 28.00 136.53 90.76
S_p1_S3_coassembly_k141_520634 34 31609 bp 28.67 166.93 90.90
S_p1_S3_coassembly_k141_1972489 24 21862 bp 28.21 133.27 91.19
S_p1_S3_coassembly_k141_1403096 5 3416 bp 26.90 168.44 91.25
S_p1_S3_coassembly_k141_1729385
Domain: Archaea (59.09%)
44 24244 bp 29.58 149.16 91.47
S_p1_S3_coassembly_k141_798049 6 5712 bp 30.32 172.72 91.86
S_p1_S3_coassembly_k141_1468252 7 2693 bp 27.92 156.91 91.94
S_p1_S3_coassembly_k141_91171 8 5064 bp 27.17 122.10 91.94
S_p1_S3_coassembly_k141_813703 11 8482 bp 28.11 123.44 91.96
S_p1_S3_coassembly_k141_2404227
Domain: Archaea (55.1%)
49 36670 bp 29.39 157.58 92.15
S_p1_S3_coassembly_k141_72843
Domain: Archaea (57.69%)
26 19622 bp 28.31 145.88 92.16
S_p1_S3_coassembly_k141_283427 16 11549 bp 29.02 142.51 92.16
S_p1_S3_coassembly_k141_2077439 7 3831 bp 28.79 140.64 92.17
S_p1_S3_coassembly_k141_2461644 11 6144 bp 28.84 143.73 92.19
S_p1_S3_coassembly_k141_490449
Domain: Archaea (53.85%)
26 22136 bp 28.83 149.38 92.25
S_p1_S3_coassembly_k141_1356338 10 7575 bp 30.34 149.35 92.36
S_p1_S3_coassembly_k141_248375
Domain: Archaea (53.33%)
15 7429 bp 29.48 167.06 92.80
S_p1_S3_coassembly_k141_218059 7 2220 bp 30.95 144.93 93.02
S_p1_S3_coassembly_k141_2069340
Domain: Archaea (57.14%)
21 23552 bp 29.89 179.16 93.07
S_p1_S3_coassembly_k141_1940258
Domain: Archaea (70.59%)
17 14673 bp 29.41 132.67 93.12
S_p1_S3_coassembly_k141_167624
Domain: Archaea (52.73%)
55 39690 bp 28.90 150.67 93.46
S_p1_S3_coassembly_k141_809221
Domain: Archaea (72.73%)
11 8013 bp 29.65 143.84 93.52
S_p1_S3_coassembly_k141_713722
Domain: Archaea (60%)
15 10206 bp 29.84 187.57 93.59
S_p1_S3_coassembly_k141_1643174
Domain: Archaea (60%)
10 5638 bp 28.88 130.53 93.70
S_p1_S3_coassembly_k141_1563795 11 14549 bp 30.52 186.19 93.72
S_p1_S3_coassembly_k141_1745234 52 39320 bp 28.98 148.75 94.01
S_p1_S3_coassembly_k141_758198
Domain: Archaea (66.67%)
9 11236 bp 29.02 173.19 94.09
S_p1_S3_coassembly_k141_206757 10 4861 bp 28.14 143.37 94.18
S_p1_S3_coassembly_k141_2132316 15 13600 bp 26.90 118.68 94.43
S_p1_S3_coassembly_k141_2272538 1 2292 bp 27.84 132.46 94.50
S_p1_S3_coassembly_k141_442112 13 9348 bp 28.37 146.73 94.74
S_p1_S3_coassembly_k141_436995 7 4939 bp 28.71 173.78 94.76
S_p1_S3_coassembly_k141_1240541 48 45517 bp 29.78 170.61 95.08
S_p1_S3_coassembly_k141_701634 7 7145 bp 28.58 153.55 95.61
S_p1_S3_coassembly_k141_1372164 17 14689 bp 27.12 117.06 95.77
S_p1_S3_coassembly_k141_138461
Domain: Archaea (86.49%)
37 20145 bp 31.40 184.73 95.99
S_p1_S3_coassembly_k141_2081898
Domain: Archaea (75%)
4 8773 bp 29.67 154.99 96.06
S_p1_S3_coassembly_k141_105285
Domain: Archaea (55.56%)
18 19142 bp 29.68 174.63 96.20
S_p1_S3_coassembly_k141_1590767
Domain: Archaea (57.14%)
7 6935 bp 27.97 143.92 97.46
S_p1_S3_coassembly_k141_2229234
Species: RBG_13_Pacearchaeota_36_9_curated (100%)
1 3718 bp 31.15 189.86 97.55
S_p1_S3_coassembly_k141_1950229
Species: CG_Pacearch_04 (50%)
2 2864 bp 30.73 161.37 98.15
S_p1_S3_coassembly_k141_879081 6 3987 bp 28.34 131.94 98.87
Displaying items 51-92 of 92 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.