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S_p1_S3_coassembly_Woesearchaeota-II_29_154

S_p1_S3_coassembly_unknown_29_153
In projects: S_p1_S3_coassembly  |  genasci-metabolism  |  NC_groundwater_CPR_DPANN  |  DPANN  |  all_nc_groundwater_genomes

Consensus taxonomy:

Taxonomy override: Woesearchaeota

Description

S_p1_S3_coassembly_Nano_Woesearchaeota_29_154; GD17-1_Sp1_coassembly_Maxbin2_193 RK

Displaying items 51-92 of 92 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
S_p1_S3_coassembly_k141_337510 8 5031 bp 29.02 140.19 89.62
S_p1_S3_coassembly_k141_2294995
Domain: Archaea (50%)
4 3088 bp 30.51 147.04 89.57
S_p1_S3_coassembly_k141_1325574
Domain: Archaea (52.63%)
19 10306 bp 26.90 112.67 89.57
S_p1_S3_coassembly_k141_1462412
Domain: Archaea (60%)
5 2953 bp 27.77 122.21 89.40
S_p1_S3_coassembly_k141_1741672 12 8230 bp 28.97 153.77 89.27
S_p1_S3_coassembly_k141_1564056
Domain: Archaea (76.47%)
17 10164 bp 28.75 124.96 89.23
S_p1_S3_coassembly_k141_1144168 15 16532 bp 29.58 158.56 89.03
S_p1_S3_coassembly_k141_1538624 6 4877 bp 29.36 146.86 88.83
S_p1_S3_coassembly_k141_1081644
Domain: Archaea (50%)
18 14084 bp 29.38 144.49 88.61
S_p1_S3_coassembly_k141_904748
Domain: Archaea (71.43%)
7 5413 bp 28.84 137.50 88.51
S_p1_S3_coassembly_k141_1661771
Domain: Archaea (68.97%)
29 21780 bp 29.57 161.34 88.23
S_p1_S3_coassembly_k141_1387406
Domain: Archaea (53.33%)
15 9825 bp 29.98 161.11 87.99
S_p1_S3_coassembly_k141_1381336 2 2064 bp 31.15 172.38 87.94
S_p1_S3_coassembly_k141_1710940
Domain: Archaea (50%)
8 4958 bp 28.92 119.87 87.80
S_p1_S3_coassembly_k141_1004605
Species: CG_Pacearch_02 (50%)
2 2560 bp 28.20 117.71 87.77
S_p1_S3_coassembly_k141_1257817
Domain: Archaea (50%)
8 3604 bp 27.64 170.77 87.65
S_p1_S3_coassembly_k141_328790
Domain: Archaea (75%)
12 9259 bp 28.05 123.33 87.64
S_p1_S3_coassembly_k141_624002 19 16992 bp 29.92 164.83 87.40
S_p1_S3_coassembly_k141_421166
Domain: Archaea (71.43%)
7 4321 bp 27.29 124.31 87.34
S_p1_S3_coassembly_k141_275235 18 11393 bp 29.93 168.95 87.24
S_p1_S3_coassembly_k141_1645490
Domain: Archaea (53.85%)
13 9713 bp 29.26 167.50 87.16
S_p1_S3_coassembly_k141_2449201 7 4053 bp 28.35 154.22 86.90
S_p1_S3_coassembly_k141_52153 8 7206 bp 30.03 178.21 86.64
S_p1_S3_coassembly_k141_583122
Domain: Archaea (62.5%)
8 4630 bp 28.62 110.25 86.57
S_p1_S3_coassembly_k141_938937
Domain: Archaea (50%)
8 4616 bp 29.74 160.11 86.31
S_p1_S3_coassembly_k141_627641 8 5070 bp 29.47 158.61 85.52
S_p1_S3_coassembly_k141_1005509 15 8312 bp 28.19 111.53 85.44
S_p1_S3_coassembly_k141_871494 15 5755 bp 29.44 135.93 85.16
S_p1_S3_coassembly_k141_581236 27 16935 bp 28.64 138.31 84.59
S_p1_S3_coassembly_k141_1429054
Domain: Archaea (50%)
4 2020 bp 28.12 125.94 83.32
S_p1_S3_coassembly_k141_1971878 26 8746 bp 27.50 183.87 82.94
S_p1_S3_coassembly_k141_1843823 14 6554 bp 27.98 172.66 82.93
S_p1_S3_coassembly_k141_893870
Domain: Archaea (50%)
4 2298 bp 28.85 142.56 81.98
S_p1_S3_coassembly_k141_2277707
Species: archaeon GW2011_AR15 (50%)
2 2198 bp 30.53 146.79 81.89
S_p1_S3_coassembly_k141_749209
Domain: Archaea (61.54%)
13 6665 bp 30.19 159.90 81.61
S_p1_S3_coassembly_k141_1475228 4 2384 bp 27.60 115.90 80.66
S_p1_S3_coassembly_k141_1910629 7 3105 bp 29.24 153.09 80.29
S_p1_S3_coassembly_k141_1899251 4 2178 bp 29.06 136.50 80.03
S_p1_S3_coassembly_k141_2391795 7 2788 bp 31.28 144.40 76.83
S_p1_S3_coassembly_k141_986613
Domain: Archaea (50%)
6 3069 bp 30.69 158.36 73.28
S_p1_S3_coassembly_k141_1743524
Domain: Archaea (75%)
4 2006 bp 28.56 138.93 72.28
S_p1_S3_coassembly_k141_1629091
Phylum: DPANN (66.67%)
3 2494 bp 29.79 148.50 70.97
Displaying items 51-92 of 92 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.