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NECEvent2014_10_1_scaffold_10

Alias: Felix_001_scaffold_10

Search features with annotation key words

Displaying items 31-60 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_10_1_scaffold_10_31
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33132..34073)
DNA (942bp) protein (314aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1172 Tax=Enterobacteriaceae RepID=RSMH_ECO24 rbh
S-adenosyl-methyltransferase MraW
NECEvent2014_10_1_scaffold_10_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34075..34533)
DNA (459bp) protein (153aa)
Protein MraZ n=5 Tax=Enterobacteriaceae RepID=C1HPP2_9ESCH rbh
mraZ; MraZ protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
NECEvent2014_10_1_scaffold_10_33
Trichuris trichiura, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

Not on your lists

comp(35135..36139)
DNA (1005bp) protein (335aa)
Catabolite repressor/activator n=1311 Tax=Enterobacteriaceae RepID=CRA_ECO57 rbh
ALS ss C and LacI and Peripla BP 3 domain contain ing protein {ECO:0000313|EMBL:CDW60552.1}; TaxID=36087 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichur
fruR; fructose repressor
NECEvent2014_10_1_scaffold_10_34
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36319..36810)
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase isozyme III small subunit {ECO:0000313|EMBL:CBG32914.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CBG32914.1};; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
Acetolactate synthase n=1 Tax=Escherichia coli ATCC 35150 RepID=U5BF65_ECOLX rbh
NECEvent2014_10_1_scaffold_10_35
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36813..38537)
DNA (1725bp) protein (575aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Escherichia coli HVH 202 (4-3163997) RepID=T7WYT3_ECOLX rbh
NECEvent2014_10_1_scaffold_10_36
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38855..39799)
DNA (945bp) protein (315aa)
Transcriptional regulator LeuO n=3 Tax=Escherichia coli RepID=B3HY40_ECOLX rbh
leuO; leucine transcriptional activator
LeuO protein; Transcriptional activator LeuO {ECO:0000313|EMBL:CDN80452.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_10_1_scaffold_10_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40635..42206
DNA (1572bp) protein (524aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=26 Tax=Escherichia coli RepID=G0D933_ECOLX rbh
NECEvent2014_10_1_scaffold_10_38
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42206..43297
DNA (1092bp) protein (364aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=259 Tax=Bacteria RepID=LEU3_ECOUT rbh
NECEvent2014_10_1_scaffold_10_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43300..44700
DNA (1401bp) protein (467aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=856 Tax=Enterobacteriaceae RepID=LEUC_ECO45 rbh
3-isopropylmalate dehydratase large subunit
NECEvent2014_10_1_scaffold_10_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44711..45316
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CDN80447.1}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:
3-isopropylmalate dehydratase small subunit n=415 Tax=Escherichia RepID=LEUD_ECO45 rbh
leuD; 3-isopropylmalate dehydratase small subunit
NECEvent2014_10_1_scaffold_10_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45423..45554)
DNA (132bp) protein (44aa)
Uncharacterized protein n=435 Tax=Enterobacteriaceae RepID=B7MAJ5_ECO45
hypothetical protein
Inhibitor of glucose transport {ECO:0000313|EMBL:EHU45383.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_10_1_scaffold_10_42
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45643..47298
DNA (1656bp) protein (552aa)
HTH-type transcriptional regulator SgrR n=27 Tax=Escherichia coli RepID=G0D928_ECOLX rbh
yabN; transcriptional regulator SgrR
HTH-type transcriptional regulator SgrR {ECO:0000256|HAMAP-Rule:MF_01449}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
NECEvent2014_10_1_scaffold_10_43
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47462..48445
DNA (984bp) protein (328aa)
Thiamin ABC transporter substrate binding component n=46 Tax=Escherichia RepID=D2NB31_ECOS5 rbh
TbpA protein; Thiamine-binding periplasmic protein {ECO:0000313|EMBL:CDN80444.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
tbpA; thiamine ABC transporter substrate-binding protein
NECEvent2014_10_1_scaffold_10_44
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48421..50031
DNA (1611bp) protein (537aa)
Thiamine/thiamine pyrophosphate ABC transporter, permease protein n=32 Tax=Escherichia coli RepID=F4STL1_ECOLX rbh
Thiamine/thiamine pyrophosphate ABC transporter, permease protein {ECO:0000313|EMBL:EGI18051.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
thiP; thiamine transporter membrane protein
NECEvent2014_10_1_scaffold_10_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50015..50713
DNA (699bp) protein (233aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
Thiamine transport ATP-binding protein n=27 Tax=Escherichia coli RepID=G0D8C3_ECOLX rbh
ssuB; aliphatic sulfonate ABC transporter ATP-binding protein
NECEvent2014_10_1_scaffold_10_46
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50827..51591)
DNA (765bp) protein (255aa)
DedA family inner membrane protein YabI n=31 Tax=Escherichia coli RepID=E7U0Y4_ECOLX rbh
yabI; putative inner membrane protein
Putative integral membrane protein YabI {ECO:0000313|EMBL:CDN80441.1}; YabI protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_10_1_scaffold_10_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51775..53262)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=35 Tax=Escherichia RepID=L2XKM1_ECOLX rbh
hypothetical protein
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:AJO81991.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
NECEvent2014_10_1_scaffold_10_48
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53272..53709)
DNA (438bp) protein (146aa)
Uncharacterized protein n=29 Tax=Escherichia RepID=L2ZWK1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC84843.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;
NECEvent2014_10_1_scaffold_10_49
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53758..54711)
DNA (954bp) protein (318aa)
Uncharacterized protein n=40 Tax=Escherichia RepID=D2NB25_ECOS5 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC84842.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;
NECEvent2014_10_1_scaffold_10_50
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54766..55689)
DNA (924bp) protein (308aa)
Dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=49 Tax=Escherichia coli RepID=D2NB24_ECOS5 rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:BAI53612.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_10_1_scaffold_10_51
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55715..56947)
DNA (1233bp) protein (411aa)
Ribokinase n=44 Tax=Escherichia RepID=L2XLJ6_ECOLX rbh
Putative ribokinase
Putative ribokinase {ECO:0000313|EMBL:CDC84840.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" so
NECEvent2014_10_1_scaffold_10_52
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57171..58016)
DNA (846bp) protein (282aa)
DNA-binding transcriptional regulator n=27 Tax=Escherichia coli RepID=G0D8B6_ECOLX rbh
araC; DNA-binding transcriptional regulator
Arabinose operon regulatory protein {ECO:0000313|EMBL:KEJ63246.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="E
NECEvent2014_10_1_scaffold_10_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58355..60055
DNA (1701bp) protein (567aa)
araB; ribulokinase (EC:2.7.1.16)
Ribulokinase {ECO:0000313|EMBL:AJO81985.1}; EC=2.7.1.16 {ECO:0000313|EMBL:AJO81985.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
Ribulokinase n=27 Tax=Escherichia coli RepID=G0D8B4_ECOLX rbh
NECEvent2014_10_1_scaffold_10_54
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60066..61568
DNA (1503bp) protein (501aa)
araA; L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1269007 species="Bacteria; P
L-arabinose isomerase n=593 Tax=Enterobacteriaceae RepID=ARAA_ECO24 rbh
NECEvent2014_10_1_scaffold_10_55
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61683..62378
DNA (696bp) protein (232aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CDL46627.1}; EC=5.1.3.4 {ECO:0000313|EMBL:CDL46627.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
L-ribulose-5-phosphate 4-epimerase n=41 Tax=Escherichia RepID=D2NB18_ECOS5 rbh
NECEvent2014_10_1_scaffold_10_56
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62453..64804
DNA (2352bp) protein (784aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
polB; DNA polymerase II (EC:2.7.7.7) rbh
DNA polymerase n=34 Tax=Escherichia coli RepID=G0D8B1_ECOLX rbh
NECEvent2014_10_1_scaffold_10_57
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64969..67875
DNA (2907bp) protein (969aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel
RNA polymerase-associated protein RapA n=313 Tax=Enterobacteriaceae RepID=RAPA_ECO27 rbh
hepA; ATP-dependent helicase HepA
NECEvent2014_10_1_scaffold_10_58
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67887..68546
DNA (660bp) protein (220aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
Ribosomal large subunit pseudouridine synthase A n=167 Tax=Escherichia coli RepID=RLUA_ECOL6 rbh
yabO; 23S rRNA/tRNA pseudouridine synthase A
NECEvent2014_10_1_scaffold_10_59
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68696..69511)
DNA (816bp) protein (272aa)
DnaJ-like protein DjlA n=35 Tax=Escherichia coli RepID=G0D8A8_ECOLX rbh
djlA; DnaJ-like protein
DnaJ-like protein DjlA {ECO:0000256|HAMAP-Rule:MF_01153}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_10_1_scaffold_10_60
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69766..72120
DNA (2355bp) protein (785aa)
LPS-assembly protein LptD n=102 Tax=Escherichia coli RepID=LPTD_ECOL5 rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
organic solvent tolerance protein
Displaying items 31-60 of 139 in total

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