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NECEvent2014_10_1_scaffold_1_290

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 319604..320731

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 375.0
  • Bit_score: 765
  • Evalue 3.40e-218
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=46 Tax=Escherichia coli RepID=D2NG55_ECOS5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 375.0
  • Bit_score: 765
  • Evalue 2.40e-218
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 375.0
  • Bit_score: 765
  • Evalue 6.90e-219
  • rbh

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGCAGTGCGCACTTTACGACGCGGGTCGCTGTCGTTCCTGTCAGTGGATAACGCAGCCGATTCCAGAGCAACTCTCCGCTAAAACTGCCGATCTTAAAAATCTGCTCGCCGATTTTCCGGTTGAGGAATGGTGTGCGCCGGTGTCAGGCCCGGAACAAGGGTTTCGTAATAAAGCCAAAATGGTGGTGAGTGGTAGCGTTGAAAAACCACTGCTCGGTATGCTGCATCGAGATGGTACACCGGAAGACCTTTGTGACTGCCCGCTTTATCCAGCCTCATTTGCGCCCGTTTTTGCGGCGCTAAAACCGTTTATCGCCCGTGCGGGGTTAACGCCCTACAACGTGGCGCGTAAACGTGGTGAACTGAAATACATTCTGCTGACTGAAAGCCAGAGCGATGGTGGCATGATGCTGCGTTTTGTACTGCGTTCTGATACCAAACTGGCGCAATTGCGTAAGGCGCTGCCGTGGTTACAGGAACAATTACCGCAGCTGAAAGTTATTACCGTCAATATTCAGCCGGTACATATGGCGATTATGGAAGGGGAGACGGAGATCTACCTGACCGAACAACAGGCACTGGCAGAGCGTTTTAATGACGTACCGCTGTGGATCCGTCCGCAAAGTTTCTTCCAGACTAATCCGGCGGTCGCCAGCCAGCTGTACGCCACCGCGCGCGACTGGGTACGACAGCTGCCGGTTAAACATATGTGGGATCTGTTCTGCGGTGTGGGTGGCTTTGGTTTACACTGCGCGACGCCTGACATGCAGTTAACCGGGATCGAAATTGCACCAGAGGCCATTGCCTGTGCGAAGCAGTCAGCCGCTGAACTGGGCTTAACGCGTTTGCAATTTCAGGCGCTGGACTCTACGCAGTTTGCCACCGCTCAGGGGGAAGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATCGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATTATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGTTATCGCATCGAACGGGTACAGCTTTTTGATATGTTCCCGCACACCGCGCACTATGAAGTGCTGACGCTACTGGTGAAGCAATAA
PROTEIN sequence
Length: 376
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMFPHTAHYEVLTLLVKQ*