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NECEvent2014_10_1_scaffold_3_9

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(9007..9684)

Top 3 Functional Annotations

Value Algorithm Source
Predicted transporter subunit: ATP-binding component of ABC superfamily n=179 Tax=Enterobacteriaceae RepID=B7UKH3_ECO27 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 225.0
  • Bit_score: 450
  • Evalue 1.00e-123
  • rbh
ybbL; ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 225.0
  • Bit_score: 450
  • Evalue 3.00e-124
ABC transporter family protein {ECO:0000313|EMBL:EGI99231.1}; TaxID=766141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella b similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 225.0
  • Bit_score: 450
  • Evalue 1.50e-123

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Taxonomy

Shigella boydii → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCAGGAAAATAGTCCTTTGCTTCAGCTACAAAACGTAGGATATCTGGCGGGTGATACGAAGATTCTTAATAACATCAATTTTTCGCTGCGTGCTGGCGAATTTAAGTTAATTACCGGTCCTTCTGGTTGTGGCAAAAGTACACTGCTAAAAATAGTTGCTTCATTGATCAGCCCAACCAGCGGAACGTTACTGTTTGAAGGTGAGGATGTCAGCACACTAAAGCCAGAAATCTACCGTCAGCAAGTCTCTTACTGCGCCCAGACGCCGACGCTGTTTGGCGATACGGTATACGATAACCTGATTTTTCCCTGGCAGATCCGTAACCAGCAGCCTGACCCGGCCATTTTTCTCGATTTTCTTGAACGCTTCGCTTTACCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCATCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTCGACGAAATCACCAGTGCGCTGGATGAAAGTAATAAACATAACGTTAATGAGATGATCCACCGTTATGTACGCGAGCAAAATATTGCTGTGCTGTGGGTGACACACGATAAAGACGAAATTAATCATGCGGATAAAGTGATTACACTGCAACCGCATGCTGGAGAAATGCAGGAAGCACGCTATGAACTCGCATAA
PROTEIN sequence
Length: 226
MQENSPLLQLQNVGYLAGDTKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYELA*