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NECEvent2014_10_1_scaffold_292_1

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 1..630

Top 3 Functional Annotations

Value Algorithm Source
Rhs element Vgr protein n=13 Tax=Escherichia coli RepID=L2ZHK7_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 401
  • Evalue 4.00e-109
type IV secretion protein Rhs similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 401
  • Evalue 1.10e-109
VgrG protein {ECO:0000313|EMBL:CDL50780.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 401
  • Evalue 5.60e-109

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GACATTATCAGCGAACTGAACAGCCTGAGCGATAAAATCCAGAAACTGTCTGACGATGCGGCCACGGCGAACGCCGATCCGGCGGATATGGCCGCGCAGGTGGCGCTGATAACCAGCCGGATAAATGACCTGACCGCCTCGGTGATTTTGATGCACGCGCCGAAAGGTGTGGCGGTCGCCAGCGGCGAGCACCTGCAACTGGCCGCAGTGAAAAACCTCCAGATAAATGCGGGAAACAACGCCGATATCGGCGTGGTGAAGAATATGTTTATCGGCGTAGGGCGGGCGCTGAGCGTGTTTGTGCGCAAGGCGGGTATCAAACTGATTGCCAATAAAGGCGCAGTATCGGTACAGGCGCAGCACGATCTGATGGAGTTACTGGCGAAGAAGTCGATAGAGATCGTCAGTACTGAGGACGAGATCAGGATTTCAGCGAAGAAAAAAATAACGATTAATGGTGGTGGAAGTTATATCCGGATTGAGGGTAGCGGCATTGAGCCGGGAACGCCGGGGGATTATAACGTCAAAGCGGTGCATTACGGGCGTATGGGAAAAGCACATGAGCCTGTTGAGTTACAAATGTTGGCAGAGAAAGTAGATGAGCCACCCGTAAAATTTTTCTTTTCTTAA
PROTEIN sequence
Length: 210
DIISELNSLSDKIQKLSDDAATANADPADMAAQVALITSRINDLTASVILMHAPKGVAVASGEHLQLAAVKNLQINAGNNADIGVVKNMFIGVGRALSVFVRKAGIKLIANKGAVSVQAQHDLMELLAKKSIEIVSTEDEIRISAKKKITINGGGSYIRIEGSGIEPGTPGDYNVKAVHYGRMGKAHEPVELQMLAEKVDEPPVKFFFS*