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NECEvent2014_10_1_scaffold_300_5

Organism: NECEvent2014_10_1_Escherichia_coli_52_196

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 4044..4424

Top 3 Functional Annotations

Value Algorithm Source
Rhs element Vgr protein n=1 Tax=Escherichia coli KTE6 RepID=L3XTX6_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 255
  • Evalue 2.80e-65
type IV secretion protein Rhs similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 255
  • Evalue 7.90e-66
VgrG protein {ECO:0000313|EMBL:CDL44251.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 255
  • Evalue 3.90e-65

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGATATCCCGACTCTGAATTTCGACCACTCACACCACAAGCTCAAAATTCGCGGCCTGAAAAGCCCGGCGGATGTGCTGACGTTTACGGGCCACGAACAGCTCAGCTCACCCTTCCGCTACGACATTGAGTTTACCAGTACCAATAAAGCAATAACGCCGGAGTCGGTGCTGATGCAGGACGGCGCATTCAGCCTGACGGCACCGCCCGTGCAGGGAATGCCGGTGCAGACTGCCCTGCGCACCCTGCACGGCGTCATTACCAGCTTTAAACACCTCTCATCGTCACAGGACGAAGCCCGTTACGAAGTGCGCCTTGAACCCCGTATGGCGCTGCTTACCCGCAGCCGCCAGAACGCCATCTACCAGAACCAGACGGTG
PROTEIN sequence
Length: 127
MDIPTLNFDHSHHKLKIRGLKSPADVLTFTGHEQLSSPFRYDIEFTSTNKAITPESVLMQDGAFSLTAPPVQGMPVQTALRTLHGVITSFKHLSSSQDEARYEVRLEPRMALLTRSRQNAIYQNQTV