ggKbase home page

NECEvent2014_10_1_scaffold_33_9

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 7964..10051

Top 3 Functional Annotations

Value Algorithm Source
Ornithine decarboxylase n=1 Tax=Lactobacillus crispatus EM-LC1 RepID=V5EP50_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 695.0
  • Bit_score: 1409
  • Evalue 0.0
  • rbh
Ornithine decarboxylase {ECO:0000313|EMBL:EST03659.1}; TaxID=1328863 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crispatus EM-LC1. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 695.0
  • Bit_score: 1409
  • Evalue 0.0
ornithine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 693.0
  • Bit_score: 1148
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2088
ATGCATTATCTAAGAATAACTGCTCGAAAAGATTTGTTGCCATATTTGCCGAAAAATTGGCCAACTATTGAATTAAAAGAGAATCTAAATGGTGCATATTTAGCCGCAGTTGTTGTCCGAAAAAAGGATAGCCGTGGAGTGGGTATGCAAAAAGTATTTGCTAAACAATTAAAGTTAGATTTACCTTTGATTATTTGGGAAGATAATCAAGATATGATAAAGGAAATTGATCAAAAAGCGAGTCAGTATGAAACAAATGTAATTCCTGAATTTCTTAGAGACTTAACTAAGTTTGCTGATCAGGACGACTTGATTTTAAGTACACCAGGACATCATAATGGTCATTTCTATGATCGTCATCCAGCTGGAGCGGTGATGAAAGAATTCTTTGGTCACAACTTGTTTAGAGCAGATGTTTCTGATAGTGTATTTGAACTGGGAGATATGATGACTCATGAGGGTGGACCATTAAAAGCAGAGGAAGAAGCCGCAAAAGCGTACAATGCTGATAAGGTTTACTTTTGCACTAATGGGACAACCAGTGCAAATACTATCTGTGCAACTGCTGTATTGAAAAATAATGATCTCGTTCTGTTTGATCGTAATAATCATAAAAGCTTATACAACAGTGCATTAATTATGACAGGTGCTAAACCTGTTTATTTACCTACTGATAGAAATGCTGATGGATTAATTGGACCATTGACTAAAGAAAGTTTAAACGAAAATAAAATTAGAGAAGAAATTGCTAAAGTTGATCCTGATCGAGCTAAAGTCAAACGTCCATTTAGAATGGCAGTATTACAGTTGGAAACATACGATGGCGTATTTTACAATGCAAAGTACTTAATTGAAAAATTGGGTAGGCTTTGTGATTATATTCTTTTTGATTGTGCTTGGGGAGGTTATGAACAATTTGTAGATGTTTTGCGCGATTTGTCACCATTACAACTGTCTTACGGTCCAGATGATCCAGGTATTCTAGTAACGCAATCTATTCATAAACAGCAAGCTGGAATTGCTCAAGCTTCTCAAATTCTTAAAAAGGATGGTCATTTGAAAGGGCAGAAGCGTTATGTTGACCATAAGCACTTCAATCATGCATATCTTAAATATGTAACCACAAGTTATTCTTATCCAATTTATTCTTCCTTAGTTGTAAATGCGAAGATGGCAAATTCACCAGCTTGCAAATCTTGGTGGGACGATACAGTTAAACTTTCAATTAAATTTAGAAAAAGATTGCTAAAGGAAAGTAAGCTTTTTAGACCGTTAGTGCCTTTAAAAATTAATGGTAAAAAATGGCAAGATATTTCTACAGAAGTGTTAATGCGTGATAAGCAAGCCTGGAAATTAAGTCCTTCTGATGATTGGCATGGATTTAATAAAATCGACGATAATGAAGTAGTTTTGAGCCCGTTAAAATTAACAGTTCTTAATCCAGGGATTGATTTAAGTGGTGAAGAATATGCTGAAGAAGGGATTCCAGGGGTTATTCTTGAAAATTATCTTCACGAAGAACGTATTATTCCAGAAAAATCTGATATATATTCAACACTTTATTTAATTACTCCTGGAGAAAGTAATGTTGATATGGAGACTTTATTTGATGCATTAATGAGGTTTGAGCATGCTTATTTGGATAAACAACCATTATCTGAAGTGATGCCGCAATTAGTTAAGAAATTTCCTGATCGCTATAAAGGATATACTCTTTACCAGCTTTGTCAGGAAATGCATCAATATTATGAGCAGAATCATATCTTTGAGCTTGAAAGAGATTTGTTTCTTAAGACAACCTTTCAAGATTATGTAATGAAGCCTGGCCAAGCTGATTTCGACTTTAATGAAAATAAAAGTCAATTAGTAGAGCTTGATAACTTAAAGGGAAGAATAGCGCTAGAAGGTGCATTACCATACCCACCAGGTGTCTTTATCGTTGCACCAGGAGAAAAATGGCAACAAATTGATATTGATTATTTCAAAATTTTACTTGGCGCGGCAGCTACTTTCCCTGGTTTTGAGCCAGAAGTTCAAGGTGTTTATAAAGATTCGGGTAAAATTGTTGGAGAGGTATTAAGGAAATAA
PROTEIN sequence
Length: 696
MHYLRITARKDLLPYLPKNWPTIELKENLNGAYLAAVVVRKKDSRGVGMQKVFAKQLKLDLPLIIWEDNQDMIKEIDQKASQYETNVIPEFLRDLTKFADQDDLILSTPGHHNGHFYDRHPAGAVMKEFFGHNLFRADVSDSVFELGDMMTHEGGPLKAEEEAAKAYNADKVYFCTNGTTSANTICATAVLKNNDLVLFDRNNHKSLYNSALIMTGAKPVYLPTDRNADGLIGPLTKESLNENKIREEIAKVDPDRAKVKRPFRMAVLQLETYDGVFYNAKYLIEKLGRLCDYILFDCAWGGYEQFVDVLRDLSPLQLSYGPDDPGILVTQSIHKQQAGIAQASQILKKDGHLKGQKRYVDHKHFNHAYLKYVTTSYSYPIYSSLVVNAKMANSPACKSWWDDTVKLSIKFRKRLLKESKLFRPLVPLKINGKKWQDISTEVLMRDKQAWKLSPSDDWHGFNKIDDNEVVLSPLKLTVLNPGIDLSGEEYAEEGIPGVILENYLHEERIIPEKSDIYSTLYLITPGESNVDMETLFDALMRFEHAYLDKQPLSEVMPQLVKKFPDRYKGYTLYQLCQEMHQYYEQNHIFELERDLFLKTTFQDYVMKPGQADFDFNENKSQLVELDNLKGRIALEGALPYPPGVFIVAPGEKWQQIDIDYFKILLGAAATFPGFEPEVQGVYKDSGKIVGEVLRK*