ggKbase home page

NECEvent2014_10_1_scaffold_118_9

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(9542..10480)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:CBL50447.1}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 619
  • Evalue 2.50e-174
Ribonuclease Z n=3 Tax=Lactobacillus crispatus RepID=D5H362_LACCS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 619
  • Evalue 1.80e-174
  • rbh
elaC; ribonuclease z similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 312.0
  • Bit_score: 619
  • Evalue 5.10e-175
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 939
ATGGAATTACAATTTTTAGGTACTGGTGCTGGGCAACCTTCAAAGCAACGCAATGTTTCTAGTGTTGCACTTAAGTTGCTGGATGAATTGAATGAAATCTGGCTTTTTGACGTAGGTGAAGCAACTCAGCATCAAATTTTAAGAACAAATATTAAATTACGAAAAGTTACCAAAATTTTTATATCACATAATCACGGTGATCACATTTTTGGGTTACCAGGGTTATTGTCAACTCGTTCTTTTCAAGGTGATGTTGGTCCTATTACTATTTATGGTCCCAGTGGTATTGAAGAATTTGTTAGAACAGCTCTTAAGGTATCTCGGACTAAAATTTCATATCCTATAAGGTTTGTTGAATTAGCTAAATCAGGGTTAATCTGTGAGGATAAGGGCTTTCGAGTGTATACGGAGCAACTAGACCACCGGATACCTAGTTTTGGTTTTAGAGTAGTGGAGGCTTCACATCCAGGCGAATTATTAATTGACAAGTTAGCACAGTATAATGTTCCTAATGGGCCACTTTTGGGGAAATTAAAAAATGGCGAAAAAGTAACTTTAGCTGATGGTACTGTTTTGGATGGTAAAAATTTCTTAGGACCTACTAAATCGGGAAGAATTGTGACGGTCATCTATGACACACGTTCCACGCCAAGTATTGCTCGTTTGGCTAAAGATGCAGATGTTTTAGTCCATGAATCAACTTTTGCAGGGGATGAACAAAAATTGGCGCATGATTATTATCATTCTACTTCGGTTGAAGCAGCCAAAATTGCTCGGAAAGATAATGTTAAATTATTATGTCTAAATCATATTTCTGCTCGTTATATGGGTGCTAAAGCGAAAAAACTCGAAAAACAGGCTAAAAAAGTATTTTCTAATACAGTATTAGTTAATGATTTTGATCAGATTAATATTCCAATGAAAGGCTCAGAAAAATGA
PROTEIN sequence
Length: 313
MELQFLGTGAGQPSKQRNVSSVALKLLDELNEIWLFDVGEATQHQILRTNIKLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVGPITIYGPSGIEEFVRTALKVSRTKISYPIRFVELAKSGLICEDKGFRVYTEQLDHRIPSFGFRVVEASHPGELLIDKLAQYNVPNGPLLGKLKNGEKVTLADGTVLDGKNFLGPTKSGRIVTVIYDTRSTPSIARLAKDADVLVHESTFAGDEQKLAHDYYHSTSVEAAKIARKDNVKLLCLNHISARYMGAKAKKLEKQAKKVFSNTVLVNDFDQINIPMKGSEK*