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NECEvent2014_10_1_scaffold_179_8

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11541..11906)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=4 Tax=Lactobacillus crispatus RepID=C2KEQ7_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 236
  • Evalue 1.30e-59
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEJ69592.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 236
  • Evalue 1.80e-59
transcriptional regulator, xre family similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 232
  • Evalue 8.90e-59

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 366
ATGCTTGTGAATATTAATTTAGGAGAAGAAATTTCTCGTAGAAGACGTGAACAGAAACTAACACAGGAAGATTTGGCTGAGCTAAGTGATCTTTCTGTAAATTTTATTTCACGTGTGGAAAGGACTAAGGACCAAAACATTAGTATTCAGAAGCTTGATTCTATTGCCAAAGCTTTGAATACTACTACACCCGATATCATTAACAATGCCTATCGTGCTAAAAAAATCAAGCCTGAAAAAATTCATGATAACAATACACCCGTTTTCATGAAAAAAGTTATTAACGAATTAAGAAAATTACCAGAACCTAAGGCTGAACGCGTATGTAAGTCTTTGATCACCCTTCTAAAAGAAATGAATAATTAA
PROTEIN sequence
Length: 122
MLVNINLGEEISRRRREQKLTQEDLAELSDLSVNFISRVERTKDQNISIQKLDSIAKALNTTTPDIINNAYRAKKIKPEKIHDNNTPVFMKKVINELRKLPEPKAERVCKSLITLLKEMNN*