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NECEvent2014_10_1_scaffold_224_4

Organism: NECEvent2014_10_1_Lactobacillus_crispatus_36_608

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3911..4117)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=10 Tax=Lactobacillus crispatus RepID=C2KDS2_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 60.0
  • Bit_score: 118
  • Evalue 3.80e-24
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEJ69932.1}; TaxID=491076 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus crisp similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 60.0
  • Bit_score: 118
  • Evalue 5.20e-24
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 42.0
  • Bit_score: 83
  • Evalue 2.20e-14

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Taxonomy

Lactobacillus crispatus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 207
ATGCAATTAAAAAGTGGTGGTCTGCAACCGCAAATTTTCGTTAAATCAAATTATTTCAAAACGAAAGGACGATCAATCATGAGATTAGGTCAAAAAATTGCGGCATTACACAAGAAAAATCATCTTTTTCAAGAAGCACTAGCTGAAAAGATGAATGTCAGTCGGCAAGCTGTATCCAATCGGTGTGTTCTTCTTTGTCAAAAGTAA
PROTEIN sequence
Length: 69
MQLKSGGLQPQIFVKSNYFKTKGRSIMRLGQKIAALHKKNHLFQEALAEKMNVSRQAVSNRCVLLCQK*