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NECEvent2014_10_1_scaffold_141_2

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(1476..2501)

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphat similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 341.0
  • Bit_score: 661
  • Evalue 8.30e-187
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V3H5_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 341.0
  • Bit_score: 659
  • Evalue 1.30e-186
  • rbh
isopentenyl pyrophosphate isomerase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 341.0
  • Bit_score: 661
  • Evalue 1.70e-187
  • rbh

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Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1026
ATGTCACAAAGATCCCAAAGAAAAGAAGAACATCTAGCATTGGCTAAGATGTTTTTTAATAGTAATAAAAATAATGATTTCAAGCATATACATCTAATTCGCCCCGCTCTTCCTGAAAGTGCTGTTAGCAAAGAAAGTATTGCAACAGAAATGTTTGGTCAAAAAATTAGTGCCCCATTTTTTATCAATGCAATGACAGGTGGATCAGATGCTTCATATACTATTAATCGACGCTTAGCTCAAGCAGCTGCTAAAGAAAATATTCCGATGGCGTTAGGTTCTGCTAGCATTCTTGAAAAAGAAATTGATCAAATCAAAAGTTTCGAAATTGCGCGACAAGAAAATCCTGATGGCCTACTTTTCGCTAACGTTAATCCAACTACTAAACCTAAAGTGGCCCAAAAGATTGTGCAGGTATTAAATGCTAACGCCCTTCAAATTCACCTTAATAGTGTTCAAGAAGCTGTGATGCCTGAAGGAGATCGGGATTTTCATTGGCTTGATAATCTAAAAGCAATTCGTCAAGCAGTCGATGTTCCAATCATCATCAAGGAAGTGGGAATGGGAATTGACCCCGAATCTTTACGAACCCTCTTGATCAATGACTTTTCAATTATTGATTTAGGTGGAAGTGGCGGAACAAATTTTGCTCAGATTGAAAATGAAAGACGAAAAAATCAAAAATTAATGTTTTTAGAAGACATTGGTCTTTCAACAGTTAAAACTTTGCTTGCTGCACGAACTATTCCGGTTAATAAAACGATTATCGCAGCCGGTGGGATTACCAATGCTTTAGATATTTTCAAGTCCTTAGTTTTAGGGGCACAATATGTTGGTATTGCAAATTATTTCTTACAGTTTGCTAATCAAGATACCGAATCTTTGATTGTCGCAATTCAAAATCTAAAATATGAGTTACGTCTTCTAACTGCCCTATTTGGATTAAAGAATATTGCTGAAGCAGATGAAGTTAAATATTATCTTGATACCGATTTATATAATTTTACTAGACAAATTTATAACTAG
PROTEIN sequence
Length: 342
MSQRSQRKEEHLALAKMFFNSNKNNDFKHIHLIRPALPESAVSKESIATEMFGQKISAPFFINAMTGGSDASYTINRRLAQAAAKENIPMALGSASILEKEIDQIKSFEIARQENPDGLLFANVNPTTKPKVAQKIVQVLNANALQIHLNSVQEAVMPEGDRDFHWLDNLKAIRQAVDVPIIIKEVGMGIDPESLRTLLINDFSIIDLGGSGGTNFAQIENERRKNQKLMFLEDIGLSTVKTLLAARTIPVNKTIIAAGGITNALDIFKSLVLGAQYVGIANYFLQFANQDTESLIVAIQNLKYELRLLTALFGLKNIAEADEVKYYLDTDLYNFTRQIYN*