ggKbase home page

NECEvent2014_10_1_scaffold_156_5

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(5321..5803)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Lactobacillus gasseri K7 RepID=S1ST43_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 313
  • Evalue 1.10e-82
  • rbh
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 160.0
  • Bit_score: 312
  • Evalue 8.90e-83
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=679196 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 160.0
  • Bit_score: 312
  • Evalue 4.40e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lactobacillus gasseri → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 483
ATGGCAGAAAAAGTTTATCCAATGACCGCTGAAGGTAAGGAAAAACTTCAGAAGGAATTAAAAAACTTAAAATTAGTAAAACGTCCAGAAGTTATTGAGAGAATTAAGGTTGCTAGATCATTCGGTGACTTATCAGAAAATTCTGAATACGATGCTGCAAAAGATGAGCAAAGTGCTGTAGAACAACGTATTGTTCGAATTGAACAAATGCTTAAGTATGCACAAGTTGTTGATGCAGATAGCGTTGATCCTAACGAAGTTTCTATCGGTAAGACTGTTACCTACACTGAAGTAGGTACTGATGATCCAGAAACCTATACTATCGTTGGATCTGATGAATCTGATCCGCTTAACGGGAAAATTTCTAATGATTCACCAATTGCTCAAGCTTTACTTGGCAAGAAAAAGGGTGAAAAGGTAACTATTAACACTCCTGGTGGAACATTTGATGTAACTATCAATGATGTTAAAACATTGAACTAA
PROTEIN sequence
Length: 161
MAEKVYPMTAEGKEKLQKELKNLKLVKRPEVIERIKVARSFGDLSENSEYDAAKDEQSAVEQRIVRIEQMLKYAQVVDADSVDPNEVSIGKTVTYTEVGTDDPETYTIVGSDESDPLNGKISNDSPIAQALLGKKKGEKVTINTPGGTFDVTINDVKTLN*