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NECEvent2014_10_1_scaffold_186_6

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 4394..4681

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNW1_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 188
  • Evalue 3.20e-45
Transcriptional regulator {ECO:0000313|EMBL:EPC49715.1}; TaxID=1256201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 95.0
  • Bit_score: 92
  • Evalue 3.30e-16
DNA-binding helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 95.0
  • Bit_score: 90
  • Evalue 2.50e-16

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Taxonomy

Lactobacillus paracasei → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCTAACAAAATTTATTTAACAGATATTGATGATCTTTTTTCCAAAGATTTACAAGATCCAACCTTTGCTAATGATGTTAAAGCAGAACTAAATAAATTAAATAGTGCTGTCGCGGTACGGAGTGAACGTGAAGCGTACGGCTGGACTCAACATGATTTAGCAGAAAAGTCGGGTTTACCACAGTCAACAATTGCTAGAGTGGAAAATGGTGCTAATACAAGCATGGATACCATTTCAAAGATTGCAAATGCATTTGGCAAGTCGTTGCAAATTAGTTTTGCTTAA
PROTEIN sequence
Length: 96
MANKIYLTDIDDLFSKDLQDPTFANDVKAELNKLNSAVAVRSEREAYGWTQHDLAEKSGLPQSTIARVENGANTSMDTISKIANAFGKSLQISFA*