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NECEvent2014_10_1_scaffold_200_15

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(9764..9946)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=11 Tax=Lactobacillus RepID=RS4_LACGA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 123
  • Evalue 7.90e-26
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 123
  • Evalue 2.20e-26
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 60.0
  • Bit_score: 123
  • Evalue 1.10e-25

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Taxonomy

Lactobacillus johnsonii → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 183
GATAAGTCAAAGAACTTGCAACAAGTTAAGGACGCTTTAGATGCAGTTGTATCACGTCCACCATTTGTTTCATTTGACGACAGCAAGATGACTGGTACTTTAGTTCGTCTTCCAGAACGTGACGAAATGGAACCAGAAGTTGATGAAGCTCTTATCGTTGAATGGTACAACAAGAAGCTTTAA
PROTEIN sequence
Length: 61
DKSKNLQQVKDALDAVVSRPPFVSFDDSKMTGTLVRLPERDEMEPEVDEALIVEWYNKKL*