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NECEvent2014_10_1_scaffold_242_2

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(857..1117)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E2T5_LACJH similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 71.0
  • Bit_score: 104
  • Evalue 4.20e-20
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEJ60835.1}; TaxID=525330 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johns similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 71.0
  • Bit_score: 104
  • Evalue 5.80e-20
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 69.0
  • Bit_score: 77
  • Evalue 2.00e-12

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Taxonomy

Lactobacillus johnsonii → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 261
GTGGTGAGAAGTTTGAAAAGACTAAGAAAATTAAGGCAAGAAAAAAAGCTGACTTTGAAAGAAGTCAGTCAGAAATTGAACAATTATGGGTTGGATCTTTCTCCTGATGCACTAGCCAAATATGAGCGAGGCGATAGAGAACCAAAGCTGGAAACATGGCAAAAATTAGCTGATTTTTTTGAAGTCTCAGTACCATATCTGCATTTGCAAGGGTTTGTTGTAAATATTGTTAAATTATATAAAGGAGAATGTTATGCCTAA
PROTEIN sequence
Length: 87
VVRSLKRLRKLRQEKKLTLKEVSQKLNNYGLDLSPDALAKYERGDREPKLETWQKLADFFEVSVPYLHLQGFVVNIVKLYKGECYA*