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NECEvent2014_10_1_scaffold_488_1

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(3..452)

Top 3 Functional Annotations

Value Algorithm Source
Rhamnogalacturonate lyase precursor (EC:4.2.2.-) similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 141.0
  • Bit_score: 182
  • Evalue 7.70e-44
Rhamnogalacturonate lyase {ECO:0000313|EMBL:AIS08354.1}; EC=4.2.2.- {ECO:0000313|EMBL:AIS08354.1};; TaxID=1545702 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacill similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 141.0
  • Bit_score: 182
  • Evalue 3.80e-43
Rhamnogalacturonate lyase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4P4_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 140.0
  • Bit_score: 295
  • Evalue 2.90e-77

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Taxonomy

Lactobacillus sp. wkB8 → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 450
ATGGAAAAACAAGACATATGCATATTGATCAAACAAATTGAAAATAATGATCAGATGATTCATGTGGCGTTTATTGATTCAAAAAGTGAACTTGGAATTGAATATCATATTATTTTGAAAAATAACGATTCTGGCATTTATTCGTATGTTAAGGCATGGAACAATACTGATCATCCCTTGAAAGTAAATGAATTAAGAACCGTTTATCGTTTTAATCAAGGCTTGTTTAATTGGAGTACAAATGGAGTTCGATTCGGCAGACAACCTTCATCAAAGGAAATGCTGAGAGGCAAAAAACTCCAAGATGAAACTTATAGGATGAAGCGAGGAGCCTTGTTTTCAAACAGTCAGATTTATTCCAAATATGATTATGCTGGGTACTATAAAGATACAGATTTCTGGGGACAAGCAGGGGATAATTTCGGTGCATGGCTAATTACACCAGATAAA
PROTEIN sequence
Length: 150
MEKQDICILIKQIENNDQMIHVAFIDSKSELGIEYHIILKNNDSGIYSYVKAWNNTDHPLKVNELRTVYRFNQGLFNWSTNGVRFGRQPSSKEMLRGKKLQDETYRMKRGALFSNSQIYSKYDYAGYYKDTDFWGQAGDNFGAWLITPDK