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NECEvent2014_10_1_scaffold_488_3

Organism: NECEvent2014_10_1_Lactobacillus_gasseri_34_15

near complete RP 49 / 55 MC: 8 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(720..1103)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V4P5_9LACO similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 127.0
  • Bit_score: 250
  • Evalue 6.90e-64
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:CCC17143.1}; TaxID=1042160 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus pentosus I similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 123.0
  • Bit_score: 137
  • Evalue 1.60e-29
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 126.0
  • Bit_score: 106
  • Evalue 5.90e-21

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Taxonomy

Lactobacillus pentosus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 384
ATTTATACATTTTTGATGTATTTAAAGCATAATGCCTATATTAATGAATTGGATTTTTCGCAAAGTAAAATAGTCAATAAAATTATTGAGTACATTAAACTTCATTATCAAGAAAAAATAAGTAATGAGATGCTTGCATCACTTAGTGGTTATTCTATCCCTCACACTGTAAGATTATTTAAAGCCGAAGTTGAGGTTACTCCAATGGAATATTTAACACGTTTTCGCTTGAGAATGGCTAAGACACTGGTAGATTTTAAGCCAGAGATTAGTATTGATGAAATAGCCTCGTTAGTTGGCTACTCGAATATTTCTTACTTTATTCAACAGTATAAAAAGATGTTTCAAACAACTCCTGGGCAGGAACGACATCATGTTTTATAA
PROTEIN sequence
Length: 128
IYTFLMYLKHNAYINELDFSQSKIVNKIIEYIKLHYQEKISNEMLASLSGYSIPHTVRLFKAEVEVTPMEYLTRFRLRMAKTLVDFKPEISIDEIASLVGYSNISYFIQQYKKMFQTTPGQERHHVL*