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NECEvent2014_1_4_Veillonella_dispar-rel_39_6

NECEvent2014_1_4_Veillonella_dispar_39_6
In projects: NECEvent2014_1_4

Consensus taxonomy: Veillonella dispar  →  Veillonella  →  Selenomonadales  →  Negativicutes  →  Firmicutes  →  Bacteria

Description

16S rRNA is 99% to Veillonella parvula DSM 2008

Displaying items 1-50 of 599 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_1_4_scaffold_63 1012A0613_scaffold_63
Species: Veillonella dispar (62.5%)
16 14682 bp 41.37 6.83 87.37
NECEvent2014_1_4_scaffold_71 1012A0613_scaffold_71
Genus: Veillonella (93.75%)
16 11906 bp 39.11 6.03 74.06
NECEvent2014_1_4_scaffold_64 1012A0613_scaffold_64
Genus: Veillonella (93.33%)
15 13963 bp 39.29 6.67 91.29
NECEvent2014_1_4_scaffold_73 1012A0613_scaffold_73
Genus: Veillonella (58.33%)
12 11203 bp 41.09 5.77 97.98
NECEvent2014_1_4_scaffold_76 1012A0613_scaffold_76
Species: Veillonella dispar (72.73%)
11 10780 bp 36.49 6.89 96.73
NECEvent2014_1_4_scaffold_80 1012A0613_scaffold_80
Genus: Veillonella (72.73%)
11 9856 bp 37.29 6.53 77.83
NECEvent2014_1_4_scaffold_85 1012A0613_scaffold_85
Species: Veillonella dispar (90.91%)
11 8905 bp 40.15 5.81 96.75
NECEvent2014_1_4_scaffold_105 1012A0613_scaffold_105
Genus: Veillonella (100%)
11 6620 bp 40.66 6.91 93.35
NECEvent2014_1_4_scaffold_107 1012A0613_scaffold_107
Species: Veillonella dispar (81.82%)
11 6604 bp 36.54 5.97 95.26
NECEvent2014_1_4_scaffold_142 1012A0613_scaffold_142
Species: Veillonella dispar (54.55%)
11 4988 bp 41.26 7.67 92.62
NECEvent2014_1_4_scaffold_83 1012A0613_scaffold_83
Genus: Veillonella (100%)
10 9012 bp 40.60 6.26 79.99
NECEvent2014_1_4_scaffold_90 1012A0613_scaffold_90
Species: Veillonella dispar (90%)
10 8047 bp 38.18 6.80 75.31
NECEvent2014_1_4_scaffold_81 1012A0613_scaffold_81
Genus: Veillonella (77.78%)
9 9754 bp 39.94 6.01 81.90
NECEvent2014_1_4_scaffold_84 1012A0613_scaffold_84
Genus: Veillonella (100%)
9 8917 bp 38.11 6.58 80.34
NECEvent2014_1_4_scaffold_86 1012A0613_scaffold_86
Species: Veillonella sp. DORA_A_3_16_22 (55.56%)
9 8633 bp 39.55 6.62 81.59
NECEvent2014_1_4_scaffold_96 1012A0613_scaffold_96
Species: Veillonella dispar (66.67%)
9 7192 bp 38.18 6.65 86.55
NECEvent2014_1_4_scaffold_173 1012A0613_scaffold_173
Genus: Veillonella (100%)
9 4269 bp 41.56 5.59 96.70
NECEvent2014_1_4_scaffold_482 1012A0613_scaffold_482 9 1896 bp 45.99 5.85 85.02
NECEvent2014_1_4_scaffold_78 1012A0613_scaffold_78
Species: Veillonella dispar (62.5%)
8 10693 bp 39.55 5.96 93.09
NECEvent2014_1_4_scaffold_87 1012A0613_scaffold_87
Order: Selenomonadales (50%)
8 8377 bp 38.77 6.55 69.31
NECEvent2014_1_4_scaffold_99 1012A0613_scaffold_99
Species: Veillonella dispar (50%)
8 6998 bp 36.62 5.49 83.00
NECEvent2014_1_4_scaffold_101 1012A0613_scaffold_101
Genus: Veillonella (100%)
8 6781 bp 37.90 6.13 87.69
NECEvent2014_1_4_scaffold_103 1012A0613_scaffold_103
Species: Veillonella dispar (50%)
8 6751 bp 38.87 6.40 76.52
NECEvent2014_1_4_scaffold_106 1012A0613_scaffold_106
Species: Veillonella dispar (75%)
8 6614 bp 41.81 6.49 94.89
NECEvent2014_1_4_scaffold_111 1012A0613_scaffold_111
Species: Veillonella dispar (87.5%)
8 6423 bp 36.74 7.33 88.70
NECEvent2014_1_4_scaffold_121 1012A0613_scaffold_121
Genus: Veillonella (100%)
8 5818 bp 36.71 5.57 91.47
NECEvent2014_1_4_scaffold_122 1012A0613_scaffold_122
Species: Veillonella dispar (75%)
8 5757 bp 37.03 5.21 86.45
NECEvent2014_1_4_scaffold_130 1012A0613_scaffold_130
Genus: Veillonella (87.5%)
8 5409 bp 40.80 6.66 75.10
NECEvent2014_1_4_scaffold_132 1012A0613_scaffold_132
Species: Veillonella dispar (50%)
8 5300 bp 38.74 5.60 89.04
NECEvent2014_1_4_scaffold_192 1012A0613_scaffold_192
Species: Veillonella dispar (50%)
8 4025 bp 40.77 5.18 95.43
NECEvent2014_1_4_scaffold_88 1012A0613_scaffold_88
Genus: Veillonella (100%)
7 8325 bp 41.89 6.11 91.96
NECEvent2014_1_4_scaffold_92 1012A0613_scaffold_92
Genus: Veillonella (86%)
7 7657 bp 37.35 5.90 93.84
NECEvent2014_1_4_scaffold_102 1012A0613_scaffold_102
Species: Veillonella dispar (71.43%)
7 6762 bp 39.57 6.03 94.59
NECEvent2014_1_4_scaffold_108 1012A0613_scaffold_108
Genus: Veillonella (85.71%)
7 6537 bp 39.48 5.76 81.63
NECEvent2014_1_4_scaffold_116 1012A0613_scaffold_116
Species: Veillonella dispar (71.43%)
7 6138 bp 42.70 6.40 93.89
NECEvent2014_1_4_scaffold_119 1012A0613_scaffold_119
Species: Veillonella sp. DORA_A_3_16_22 (57.14%)
7 5861 bp 38.53 6.19 91.62
NECEvent2014_1_4_scaffold_120 1012A0613_scaffold_120
Species: Veillonella dispar (57.14%)
7 5822 bp 40.33 6.54 87.19
NECEvent2014_1_4_scaffold_123 1012A0613_scaffold_123
Species: Veillonella sp. DORA_A_3_16_22 (57.14%)
7 5755 bp 40.16 5.26 85.80
NECEvent2014_1_4_scaffold_144 1012A0613_scaffold_144
Genus: Veillonella (100%)
7 4969 bp 35.18 6.61 67.02
NECEvent2014_1_4_scaffold_150 1012A0613_scaffold_150
Genus: Veillonella (85.71%)
7 4841 bp 38.67 6.32 80.25
NECEvent2014_1_4_scaffold_164 1012A0613_scaffold_164
Species: Veillonella dispar (85.71%)
7 4502 bp 39.52 4.83 94.29
NECEvent2014_1_4_scaffold_171 1012A0613_scaffold_171
Species: Veillonella dispar (57.14%)
7 4344 bp 36.81 6.08 75.28
NECEvent2014_1_4_scaffold_179 1012A0613_scaffold_179
Species: Veillonella dispar (100%)
7 4161 bp 39.85 6.49 78.44
NECEvent2014_1_4_scaffold_181 1012A0613_scaffold_181
Species: Veillonella dispar (57.14%)
7 4152 bp 39.38 6.07 93.28
NECEvent2014_1_4_scaffold_230 1012A0613_scaffold_230
Species: Veillonella dispar (85.71%)
7 3599 bp 34.29 6.88 87.36
NECEvent2014_1_4_scaffold_241 1012A0613_scaffold_241
Genus: Veillonella (100%)
7 3484 bp 41.93 6.37 90.50
NECEvent2014_1_4_scaffold_75 1012A0613_scaffold_75
Genus: Veillonella (100%)
6 11077 bp 37.45 6.08 95.41
NECEvent2014_1_4_scaffold_348 1012A0613_scaffold_348
Species: Veillonella dispar (66.67%)
6 2685 bp 36.42 6.26 83.35
NECEvent2014_1_4_scaffold_98 1012A0613_scaffold_98
Species: Veillonella sp. DORA_A_3_16_22 (50%)
6 7022 bp 37.97 6.41 85.53
NECEvent2014_1_4_scaffold_359 1012A0613_scaffold_359
Genus: Veillonella (100%)
6 2585 bp 31.64 6.91 77.76
Displaying items 1-50 of 599 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.