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NECEvent2014_1_5_scaffold_532_1

Organism: NECEvent2014_1_5_Klebsiella_oxytoca_56_492

near complete RP 46 / 55 MC: 7 BSCG 41 / 51 ASCG 14 / 38 MC: 2
Location: 1..2556

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 622.0
  • Bit_score: 1189
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N5L2_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 622.0
  • Bit_score: 1189
  • Evalue 0.0
  • rbh
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 619.0
  • Bit_score: 1153
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2556
AAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAACCAGTTCCGCGTTGGCCTGGTCCGCGTAGAGCGTGCGGTGAAAGAGCGTCTGTCTCTGGGCGATCTGGATACCCTGATGCCTCAGGATATGATCAACGCCAAGCCGATTTCTGCGGCAGTGAAAGAGTTCTTTGGCTCCAGCCAGCTGTCTCAGTTTATGGACCAGAACAACCCGCTGTCTGAGATTACGCACAAACGTCGTATCTCTGCACTCGGCCCGGGCGGTCTGACCCGTGAACGCGCAGGCTTTGAAGTTCGAGACGTACACCCGACCCACTACGGTCGCGTATGTCCAATCGAAACGCCTGAAGGTCCGAACATCGGTCTGATCAACTCCCTGTCCGTGTACGCACAGACGAACGAATACGGTTTCCTCGAGACCCCGTACCGTAAAGTGACTGACGGTGTTGTAACCGACGAAATTCATTACCTGTCTGCTATCGAAGAAGGCAACTACGTTATTGCTCAGGCGAACTCCAACCTGGATGACGAAGGCCACTTTGTAGAAGATCTGGTTACCTGCCGTAGTAAAGGCGAATCCAGCTTGTTCAGCCGCGACCAGGTTGACTACATGGACGTATCCACCCAGCAGGTGGTATCCGTCGGTGCGTCCCTGATCCCGTTCCTGGAACACGATGACGCCAACCGTGCATTGTACCCGGGTGAAGCCGGTATCGACATCTATAACCTGACCAAGTACACCCGTTCTAACCAGAACACCTGCATCAACCAGATGCCGTGTGTCTCTCTGGGTGAGCCGATTGAGCGCGGTGACGTGCTGGCTGACGGCCCGTCTACCGACCTCGGTGAACTGGCGCTCGGTCAGAACATGCGCGTCGCGTTCATGCCGTGGAACGGTTACAACTTCGAAGACTCCATCCTCGTTTCCGAGCGCGTTGTCCAGGAAGACCGTTTTACCACCATCCACATTCAGGAACTGGCGTGCGTGTCTCGTGACACCAAGCTGGGGCCGGAAGAGATCACCGCCGACATCCCGAACGTGGGTGAAGCTGCGCTCTCTAAACTGGATGAATCCGGTATCGTTTATATCGGCGCGGAAGTGACCGGTGGCGATATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACCCAGCTGACGCCGGAAGAGAAACTGCTGCGTGCGATCTTCGGTGAGAAAGCGTCTGACGTTAAAGACTCTTCCCTGCGCGTACCAAACGGTGTCTCCGGTACCATTATCGACGTTCAGGTCTTTACCCGCGACGGCGTAGAAAAAGACAAACGTGCGCTGGAAATTGAAGAGATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCTCGAAGCTGGCCTGTTTGGTCGTATCTACGCGGTGCTGGTCTCCGGCGGTATCGAAGCTGAGAAGCTCGATAAGCTGCCGCGCGATCGCTGGCTGGAACTGGGCCTGACCGACGAAGAGAAACAGAATCAGCTGGAACAGCTGGCTGAGCAGTACGACGAACTGAAACACGAGTTCGAGAAAAAACTCGAAGCGAAACGCCGCAAAATCACTCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTCAAAGTGTATCTGGCCGTTAAACGTCAGATTCAGCCTGGTGACAAAATGGCAGGCCGTCACGGTAACAAGGGTGTTATCTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGCACGCCGGTTGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTGGAAACTCACCTGGGTATGGCTGCGAAAGGTATTGGCGAGAAAATCAACGCCATGCTGAAACAGCAGCAGGAAGTCGCCAAACTGCGCGAATTCATCCAGCGTGCCTACGATCTGGGCACCGACGTGCGTCAGAAGGTTGATCTGAATACCTTCACTGACGAAGAAGTTATGCGTCTCGCTGAAAACCTGAAAAAAGGTATGCCGATCGCAACGCCGGTCTTCGACGGTGCGAAAGAGTCTGAAATCAAGGAACTGTTACAGCTTGGTGGCCTGCCGACTTCCGGCCAGATCACCCTGTTCGATGGTCGTACCGGTGAGCAATTCGAGCGCCAGGTTACCGTTGGCTACATGTACATGCTGAAACTGAACCACCTGGTTGATGACAAGATGCATGCGCGTTCTACCGGTTCTTACAGCCTGGTTACTCAGCAGCCGCTGGGTGGTAAGGCGCAGTTCGGTGGTCAGCGCTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATATGGCGCAGCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGCCGTACTAAGATGTATAAGAACATCGTGGACGGCAACCATCAGATGGAACCGGGCATGCCGGAATCCTTCAACGTACTGTTGAAAGAGATTCGCTCGCTGGGCATCAACATCGAACTGGAAGACGAGTAA
PROTEIN sequence
Length: 852
KLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTIIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLFGRIYAVLVSGGIEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKQQQEVAKLREFIQRAYDLGTDVRQKVDLNTFTDEEVMRLAENLKKGMPIATPVFDGAKESEIKELLQLGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE*